RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 PPIP5K2O43314 1243 aa15.71■□□□□ 0.11
SYNGAP1-203ENST00000428982 VCAM1P19320 739 aa15.71■□□□□ 0.11
SYNGAP1-203ENST00000428982 RAD23BP54727 409 aa15.71■□□□□ 0.11
SYNGAP1-203ENST00000428982 XRCC4Q13426 336 aa15.71■□□□□ 0.11
SYNGAP1-203ENST00000428982 NANOGNBQ7Z5D8 188 aa15.71■□□□□ 0.11
SYNGAP1-203ENST00000428982 ZNF653Q96CK0 615 aa15.71■□□□□ 0.11
SYNGAP1-203ENST00000428982 LRRC27Q9C0I9 530 aa15.71■□□□□ 0.11
SYNGAP1-203ENST00000428982 FAM237AA0A1B0GTK4 181 aa15.71■□□□□ 0.1
SYNGAP1-203ENST00000428982 CCT8L1PA6NM43 557 aa15.71■□□□□ 0.1
SYNGAP1-203ENST00000428982 KRT71Q3SY84 523 aa15.71■□□□□ 0.1
SYNGAP1-203ENST00000428982 RRP36Q96EU6 259 aaKnown RBP15.71■□□□□ 0.1
SYNGAP1-203ENST00000428982 INTUQ9ULD6 942 aa15.71■□□□□ 0.1
SYNGAP1-203ENST00000428982 EPN1Q9Y6I3 576 aaPredicted RBP15.71■□□□□ 0.1
SYNGAP1-203ENST00000428982 H7C1D1 291 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 SUPT3HO75486 399 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 UPP2O95045 317 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 CCT6AP40227 531 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 ANTXR2P58335 489 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 MORC3Q14149 939 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 SEPT7Q16181 437 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 METTL16Q86W50 562 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 SNRNP27Q8WVK2 155 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 TAF4BQ92750 862 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 ATXN10Q9UBB4 475 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 MARF1Q9Y4F3 1742 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 MGRN1O60291 552 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 TRIM21P19474 475 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 SERPINB4P48594 390 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 EZH2Q15910 746 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 RAD9BQ6WBX8 426 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 LZICQ8WZA0 190 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 DPPA5A6NC42 116 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 ILDR1Q86SU0 546 aaPredicted RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 AIFM3Q96NN9 605 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 IWS1Q96ST2 819 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 MPHOSPH6Q99547 160 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 YIPF2Q9BWQ6 316 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 LY9Q9HBG7 655 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 CHMP2BQ9UQN3 213 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 TSPY3P0CV98 308 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 TSPY8P0CW00 308 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 SLC15A2Q16348 729 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 MAEAQ7L5Y9 396 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 TSG101Q99816 390 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 CSRNP2Q9H175 543 aa15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 PIH1D3Q9NQM4 214 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-203ENST00000428982 PPARAQ07869 468 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 ZNF174Q15697 407 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 CYB5R4Q7L1T6 521 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 MAP7D3Q8IWC1 876 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 ZFAND2BQ8WV99 257 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 RAB34Q9BZG1 259 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 ATRNO75882 1429 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 KCPQ6ZWJ8 1503 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 TLDC2A0PJX2 215 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 FANCGO15287 622 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 GHRP10912 638 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 APBB1IPQ7Z5R6 666 aaPredicted RBP15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 EBF2Q9HAK2 575 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 EXOC1Q9NV70 894 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 LGR5O75473 907 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 DDAH1O94760 285 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 GUCY2DQ02846 1103 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 PTPAQ15257 358 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 TMEM132AQ24JP5 1023 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 RASGRP2Q7LDG7 609 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 ZKSCAN3Q9BRR0 538 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 STX8Q9UNK0 236 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 DAAM1Q9Y4D1 1078 aa15.69■□□□□ 0.1
SYNGAP1-203ENST00000428982 DYTNA2CJ06 578 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 TROVE2P10155 538 aaKnown RBP eCLIP15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 NT5C2P49902 561 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 DOK7Q18PE1 504 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 CFAP157Q5JU67 520 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 DTHD1Q6ZMT9 781 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 TMEM110Q86TL2 294 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 ANKRD27Q96NW4 1050 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 CRAMP1Q96RY5 1269 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 BMP2KQ9NSY1 1161 aaPredicted RBP15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 ZSWIM5Q9P217 1185 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 V9GY48 417 aaPredicted RBP15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 MFAP3LO75121 409 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 CD151P48509 253 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 ZBED6P86452 979 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 CCDC174Q6PII3 467 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 CALML4Q96GE6 196 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 NDNQ99608 321 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 VPS16Q9H269 839 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 PHF20L1A8MW92 1017 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 CHGBP05060 677 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 ZNF827Q17R98 1081 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 NUGGCQ68CJ6 796 aa15.68■□□□□ 0.1
SYNGAP1-203ENST00000428982 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms