RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 FAM160B2Q86V87 743 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 SPICE1Q8N0Z3 855 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 LARGE2Q8N3Y3 721 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 SCFD1Q8WVM8 642 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 PURBQ96QR8 312 aaKnown RBP15.13■□□□□ 0.01
THBS3-202ENST00000428962 KCTD10Q9H3F6 313 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 ZHX3Q9H4I2 956 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 TBC1D7Q9P0N9 293 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 CEP72Q9P209 647 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.13■□□□□ 0.01
THBS3-202ENST00000428962 CLRN2A0PK11 232 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 CETN3O15182 167 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 PLA2G6O60733 806 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 HOXA13P31271 388 aaPredicted RBP15.12■□□□□ 0.01
THBS3-202ENST00000428962 EPS15P42566 896 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 KIF11P52732 1056 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 ARSHQ5FYA8 562 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 UTP14CQ5TAP6 766 aaKnown RBP15.12■□□□□ 0.01
THBS3-202ENST00000428962 PAPD7Q5XG87 772 aaKnown RBP15.12■□□□□ 0.01
THBS3-202ENST00000428962 PDXDC1Q6P996 788 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 RRAGAQ7L523 313 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 NELFCDQ8IXH7 590 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 SYN2Q92777 582 aaPredicted RBP15.12■□□□□ 0.01
THBS3-202ENST00000428962 SECISBP2LQ93073 1101 aaKnown RBP15.12■□□□□ 0.01
THBS3-202ENST00000428962 RPGRIP1Q96KN7 1286 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 IFIH1Q9BYX4 1025 aaKnown RBP15.12■□□□□ 0.01
THBS3-202ENST00000428962 PRDM10Q9NQV6 1147 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 VAV3Q9UKW4 847 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 MRPL11Q9Y3B7 192 aaKnown RBP15.12■□□□□ 0.01
THBS3-202ENST00000428962 SAR1BQ9Y6B6 198 aa15.12■□□□□ 0.01
THBS3-202ENST00000428962 NPHP3-ACAD11A0A0J9YXS1 232 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 SSU72P8A0A1W2PR75 194 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 GCOM1H8Y6P7 765 aaPredicted RBP15.11■□□□□ 0.01
THBS3-202ENST00000428962 NKRFO15226 690 aaKnown RBP eCLIP15.11■□□□□ 0.01
THBS3-202ENST00000428962 TBC1D12O60347 775 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 TBCAO75347 108 aaKnown RBP15.11■□□□□ 0.01
THBS3-202ENST00000428962 LCA5LO95447 670 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 POLR2MP0CAP2 368 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 SPATA31C1P0DKV0 1188 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 ECE1P42892 770 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 DMTNQ08495 405 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
THBS3-202ENST00000428962 GIT2Q14161 759 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 TRIM59Q8IWR1 403 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 TRIM58Q8NG06 486 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 HNRNPLLQ8WVV9 542 aaKnown RBP15.11■□□□□ 0.01
THBS3-202ENST00000428962 BAP1Q92560 729 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 UIMC1Q96RL1 719 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 GMLQ99445 158 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 GBP3Q9H0R5 595 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 RANBP17Q9H2T7 1088 aaKnown RBP15.11■□□□□ 0.01
THBS3-202ENST00000428962 TUFT1Q9NNX1 390 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 ARHGAP20Q9P2F6 1191 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 RAB21Q9UL25 225 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 KIF13BQ9NQT8 1826 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 CNTNAP1P78357 1384 aa15.11■□□□□ 0.01
THBS3-202ENST00000428962 EPHB6O15197 1021 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 CALUO43852 315 aaPredicted RBP15.1■□□□□ 0.01
THBS3-202ENST00000428962 AKR1B10O60218 316 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 RAD17O75943 681 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 EYA4O95677 639 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 FAM193AP78312 1265 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 CACNB1Q02641 598 aaPredicted RBP15.1■□□□□ 0.01
THBS3-202ENST00000428962 MAPK8IP2Q13387 824 aaPredicted RBP15.1■□□□□ 0.01
THBS3-202ENST00000428962 REEP2Q9BRK0 252 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 FGFBP2Q9BYJ0 223 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 VCPKMTQ9H867 229 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 ANKZF1Q9H8Y5 726 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 LUC7LQ9NQ29 371 aaKnown RBP15.1■□□□□ 0.01
THBS3-202ENST00000428962 RABGAP1Q9Y3P9 1069 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 PCDHA13Q9Y5I0 950 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 TACC1O75410 805 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 GAP43P17677 238 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 MUTP22033 750 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 EIF4A3P38919 411 aaKnown RBP15.1■□□□□ 0.01
THBS3-202ENST00000428962 ADAM9Q13443 819 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 KNOP1Q1ED39 458 aaKnown RBP15.1■□□□□ 0.01
THBS3-202ENST00000428962 IQCEQ6IPM2 695 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 FAM83AQ86UY5 434 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 ACER1Q8TDN7 264 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 ALS2CR12Q96Q35 445 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 EIF2AK1Q9BQI3 630 aaKnown RBP15.1■□□□□ 0.01
THBS3-202ENST00000428962 LACRTQ9GZZ8 138 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 TRAF3IP3Q9Y228 551 aa15.1■□□□□ 0.01
THBS3-202ENST00000428962 ATAD5Q96QE3 1844 aa15.09■□□□□ 0.01
THBS3-202ENST00000428962 IGLV3-22A0A075B6J6 115 aa15.09■□□□□ 0.01
THBS3-202ENST00000428962 MEIS1O00470 390 aa15.09■□□□□ 0.01
THBS3-202ENST00000428962 SEC31AO94979 1220 aaKnown RBP15.09■□□□□ 0.01
THBS3-202ENST00000428962 CFBP00751 764 aa15.09■□□□□ 0.01
THBS3-202ENST00000428962 ATP1A1P05023 1023 aaKnown RBP15.09■□□□□ 0.01
THBS3-202ENST00000428962 NR2F2P24468 414 aa15.09■□□□□ 0.01
THBS3-202ENST00000428962 MCM3P25205 808 aa15.09■□□□□ 0.01
THBS3-202ENST00000428962 YY1P25490 414 aa15.09■□□□□ 0.01
THBS3-202ENST00000428962 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
THBS3-202ENST00000428962 CYP27A1Q02318 531 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms