RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 PIGSQ96S52 555 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 IWS1Q96ST2 819 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 AMNQ9BXJ7 453 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 C11orf16Q9NQ32 467 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 NID2Q14112 1375 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
APOBEC3C-202ENST00000428892 LGR5O75473 907 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 RCAN1P53805 252 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 FUT2Q10981 343 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 LAMC2Q13753 1193 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 ZNF618Q5T7W0 954 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 CCDC62Q6P9F0 684 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 BLOC1S2Q6QNY1 142 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 FANCBQ8NB91 859 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 TBC1D5Q92609 795 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 KAT2BQ92831 832 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 IL17RAQ96F46 866 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 SAMD11Q96NU1 681 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 TAAR1Q96RJ0 339 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 YME1L1Q96TA2 773 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 LZTS2Q9BRK4 669 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 C17orf80Q9BSJ5 609 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 BACH2Q9BYV9 841 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 TM6SF1Q9BZW5 370 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 COL20A1Q9P218 1284 aa12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 MRPL11Q9Y3B7 192 aaKnown RBP12.49□□□□□ -0.41
APOBEC3C-202ENST00000428892 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 F2P00734 622 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 CFBP00751 764 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 MYCLP12524 364 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 THPOP40225 353 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 GNAQP50148 359 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 EVCP57679 992 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 RAB11FIP4Q86YS3 637 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 CTAGE1Q96RT6 745 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 CD320Q9NPF0 282 aa12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 FAM217BQ9NTX9 383 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3C-202ENST00000428892 MUC6Q6W4X9 2439 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 H3BQ06 376 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 MAP3K13O43283 966 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 SORBS3O60504 671 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 EIF3JO75822 258 aaKnown RBP12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 SEC24BO95487 1268 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 PSMA5P28066 241 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 HSD17B4P51659 736 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 GPNMBQ14956 572 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 KCNV1Q6PIU1 500 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 Q6ZUG5 572 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 RUFY3Q7L099 469 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 HOMER1Q86YM7 354 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 MRPL38Q96DV4 380 aaKnown RBP12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 SPATA33Q96N06 139 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 PXMP2Q9NR77 195 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
APOBEC3C-202ENST00000428892 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 KLF18A0A0U1RQI7 1052 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 C17orf102A2RUQ5 167 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 ZBTB43O43298 467 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 DCXO43602 365 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 UPP2O95045 317 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 NR3C2P08235 984 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 TRAF1Q13077 416 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 GPM6BQ13491 265 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 TCTN1Q2MV58 587 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 EPC2Q52LR7 807 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 SAMD3Q8N6K7 520 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 DBF4BQ8NFT6 615 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 SEPT8Q92599 483 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 BRF1Q92994 677 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 MLXIPQ9HAP2 919 aa12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 MAP3K20Q9NYL2 800 aaKnown RBP12.46□□□□□ -0.41
APOBEC3C-202ENST00000428892 GRXCR2A6NFK2 248 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 NOP56O00567 594 aaKnown RBP12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 GGPS1O95749 300 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 CDC27P30260 824 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 ANAPC15P60006 121 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 ZNF200P98182 395 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 TOB2Q14106 344 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 RTN1Q16799 776 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms