RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 SLC9A1P19634 815 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 SMARCA1P28370 1054 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 POTEBQ6S5H4 581 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 MAATS1Q7Z4T9 603 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 ADGRF4Q8IZF3 695 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 SYN2Q92777 582 aaPredicted RBP17.28■□□□□ 0.36
GHDC-203ENST00000428494 AP1M1Q9BXS5 423 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 MTMR4Q9NYA4 1195 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 PLAAQ9Y263 795 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 THRAP3Q9Y2W1 955 aaKnown RBP17.28■□□□□ 0.36
GHDC-203ENST00000428494 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
GHDC-203ENST00000428494 AKR1B1P15121 316 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 NR1D1P20393 614 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 ERVK-9P63128 1117 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 KCNH2Q12809 1159 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 HLTFQ14527 1009 aaKnown RBP eCLIP17.28■□□□□ 0.36
GHDC-203ENST00000428494 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 CD209Q9NNX6 404 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
GHDC-203ENST00000428494 CLGNO14967 610 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 HPDP32754 393 aaPredicted RBP17.27■□□□□ 0.36
GHDC-203ENST00000428494 STAT3P40763 770 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 CASP5P51878 434 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 CEP85LQ5SZL2 805 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 KDM7AQ6ZMT4 941 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 ZNF571Q7Z3V5 609 aaPredicted RBP17.27■□□□□ 0.36
GHDC-203ENST00000428494 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 NUCKS1Q9H1E3 243 aaKnown RBP17.27■□□□□ 0.36
GHDC-203ENST00000428494 GANQ9H2C0 597 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 KCTD10Q9H3F6 313 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 MYH4Q9Y623 1939 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 PLA2G4BP0C869 781 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 GPSM2P81274 684 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 ASIC2Q16515 512 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
GHDC-203ENST00000428494 LRRC27Q9C0I9 530 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 BMP2KQ9NSY1 1161 aaPredicted RBP17.27■□□□□ 0.36
GHDC-203ENST00000428494 AIPL1Q9NZN9 384 aa17.27■□□□□ 0.36
GHDC-203ENST00000428494 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 EPS15P42566 896 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 NAA35Q5VZE5 725 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 PPP4R3AQ6IN85 833 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L6PQ6QN14 398 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 DPP8Q6V1X1 898 aaPredicted RBP17.26■□□□□ 0.35
GHDC-203ENST00000428494 MMS22LQ6ZRQ5 1243 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 DHX37Q8IY37 1157 aaKnown RBP17.26■□□□□ 0.35
GHDC-203ENST00000428494 ATP6V1G3Q96LB4 118 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 LUC7LQ9NQ29 371 aaKnown RBP17.26■□□□□ 0.35
GHDC-203ENST00000428494 MYH7BA7E2Y1 1941 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 CEP104O60308 925 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 HNRNPH1P31943 449 aaKnown RBP17.26■□□□□ 0.35
GHDC-203ENST00000428494 GRAPQ13588 217 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 RPS6KA1Q15418 735 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 MFSD14BQ5SR56 506 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 KCNV1Q6PIU1 500 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 IRF2BP2Q7Z5L9 587 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
GHDC-203ENST00000428494 CEP63Q96MT8 703 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 EPN3Q9H201 632 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 BCAS3Q9H6U6 928 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 CAPN7Q9Y6W3 813 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 SBF2Q86WG5 1849 aa17.26■□□□□ 0.35
GHDC-203ENST00000428494 USP17L10C9JJH3 530 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 MYO1FO00160 1098 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 ECHS1P30084 290 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 NOVP48745 357 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
GHDC-203ENST00000428494 ARSHQ5FYA8 562 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 SPATA31A5Q5VU36 1347 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 MREGQ8N565 214 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 NEUROG2Q9H2A3 272 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 TMEM59LQ9UK28 342 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 PPP1R37O75864 691 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 UFL1O94874 794 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 NR2F2P24468 414 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 FLT3P36888 993 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 CCDC65Q8IXS2 484 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 TAF4BQ92750 862 aa17.25■□□□□ 0.35
GHDC-203ENST00000428494 DDX47Q9H0S4 455 aaKnown RBP17.25■□□□□ 0.35
GHDC-203ENST00000428494 TAF1DQ9H5J8 278 aaPredicted RBP17.25■□□□□ 0.35
GHDC-203ENST00000428494 PNMA6FA0A0J9YX94 578 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 KRT18P05783 430 aaKnown RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 CYP11B2P19099 503 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 HSD17B3P37058 310 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms