RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 USP14P54578 494 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 RPS6P62753 249 aaKnown RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 ERVK-24P63145 666 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 MCF2L2Q86YR7 1114 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 APOBEC3FQ8IUX4 373 aaKnown RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 TEX2Q8IWB9 1127 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 GPC2Q8N158 579 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 PIAS4Q8N2W9 510 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 CCDC51Q96ER9 411 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 CHP1Q99653 195 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 MXRA8Q9BRK3 442 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 RUSC1Q9BVN2 902 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 MRPL44Q9H9J2 332 aaKnown RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 LZTFL1Q9NQ48 299 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 GINM1Q9NU53 330 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 AGPAT5Q9NUQ2 364 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 VWA5AO00534 786 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 ZBED4O75132 1171 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 CCDC175P0C221 793 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 EIF2AK2P19525 551 aaKnown RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 FKBP3Q00688 224 aaKnown RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 PPP2R5CQ13362 524 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 TRIM14Q14142 442 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 LRRC55Q6ZSA7 311 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 SFR1Q86XK3 245 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 SYTL5Q8TDW5 730 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 TRERF1Q96PN7 1200 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 TAAR1Q96RJ0 339 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 NDST4Q9H3R1 872 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 UNC45AQ9H3U1 944 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 ZNF112Q9UJU3 913 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 RIPK3Q9Y572 518 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 BRCA1P38398 1863 aaKnown RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 PITPNM2Q9BZ72 1349 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 RASSF10A6NK89 507 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 FANCGO15287 622 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 EYA4O95677 639 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 FGFR1OPO95684 399 aaKnown RBP11.53□□□□□ -0.56
HDAC9-210ENST00000428307 GNG11P61952 73 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 VWA3BQ502W6 1294 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 ZCWPW2Q504Y3 356 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 FKBP15Q5T1M5 1219 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 TMTC1Q8IUR5 882 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 OR8K1Q8NGG5 319 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 AS3MTQ9HBK9 375 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 WRAP73Q9P2S5 460 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-210ENST00000428307 FRMD3A2A2Y4 597 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 MYCLP12524 364 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-210ENST00000428307 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-210ENST00000428307 RINT1Q6NUQ1 792 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 TRMT1LQ7Z2T5 733 aaKnown RBP11.53□□□□□ -0.56
HDAC9-210ENST00000428307 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 BANK1Q8NDB2 785 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 ACRBPQ8NEB7 543 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 TEKT3Q9BXF9 490 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-210ENST00000428307 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-210ENST00000428307 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
HDAC9-210ENST00000428307 PRPF6O94906 941 aaKnown RBP11.52□□□□□ -0.57
HDAC9-210ENST00000428307 MRPS9P82933 396 aaKnown RBP11.52□□□□□ -0.57
HDAC9-210ENST00000428307 TSR1Q2NL82 804 aaKnown RBP11.52□□□□□ -0.57
HDAC9-210ENST00000428307 RNF207Q6ZRF8 634 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 WDR24Q96S15 920 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 KCTD10Q9H3F6 313 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 CTIFO43310 598 aaKnown RBP11.52□□□□□ -0.57
HDAC9-210ENST00000428307 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.57
HDAC9-210ENST00000428307 MYBP10242 640 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 ADAM9Q13443 819 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 MAN2A1Q16706 1144 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 TKFCQ3LXA3 575 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 CCDC40Q4G0X9 1142 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 KRT26Q7Z3Y9 468 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 RMDN3Q96TC7 470 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 LXNQ9BS40 222 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 MMRN2Q9H8L6 949 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 SPON1Q9HCB6 807 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-210ENST00000428307 SAMM50Q9Y512 469 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 COL4A3BPQ9Y5P4 624 aa11.52□□□□□ -0.57
HDAC9-210ENST00000428307 GOLGA6L9A6NEM1 432 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 KIF20AO95235 890 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 ABL1P00519 1130 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 FECHP22830 423 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 KCNA1Q09470 495 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-210ENST00000428307 MTMR1Q13613 665 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 BAATQ14032 418 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-210ENST00000428307 SNRNP48Q6IEG0 339 aaKnown RBP11.51□□□□□ -0.57
HDAC9-210ENST00000428307 WDR59Q6PJI9 974 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms