RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 TNNC2P02585 160 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 RASA1P20936 1047 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 EXOSC10Q01780 885 aaKnown RBP11.66□□□□□ -0.54
TCOF1-204ENST00000427724 BIRC2Q13490 618 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 THNSL1Q8IYQ7 743 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 SCFD2Q8WU76 684 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 P2RX7Q99572 595 aaKnown RBP11.66□□□□□ -0.54
TCOF1-204ENST00000427724 POLD4Q9HCU8 107 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
TCOF1-204ENST00000427724 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 COL4A3BPQ9Y5P4 624 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 MYO5BQ9ULV0 1848 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 KIF1AQ12756 1690 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 H0YCG3 227 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 PPP4CP60510 307 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 CYB5R4Q7L1T6 521 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 GOLGA5Q8TBA6 731 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 NAPGQ99747 312 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-204ENST00000427724 K7ERI5 159 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 CALUO43852 315 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-204ENST00000427724 ADCY3O60266 1144 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 PQBP1O60828 265 aaKnown RBP11.66□□□□□ -0.54
TCOF1-204ENST00000427724 ACTN2P35609 894 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 ELMSAN1Q6PJG2 1045 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 MYOCDQ8IZQ8 938 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 CSGALNACT2Q8N6G5 542 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 CCDC155Q8N6L0 562 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 CSRNP2Q9H175 543 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 STARD7Q9NQZ5 370 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 MYO6Q9UM54 1294 aa11.66□□□□□ -0.54
TCOF1-204ENST00000427724 KRT86O43790 486 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 PAK1Q13153 545 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 GBP6Q6ZN66 633 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 KCNB2Q92953 911 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 FERMT1Q9BQL6 677 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 PLEKHA4Q9H4M7 779 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 PDE11AQ9HCR9 933 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 KIAA0100Q14667 2235 aaKnown RBP11.65□□□□□ -0.54
TCOF1-204ENST00000427724 EFCAB8A8MWE9 144 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 WDR64B1ANS9 1081 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 hCG_1984214I3L0E3 225 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 NFKBIEO00221 500 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 ZNF543Q08ER8 600 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 KIF5AQ12840 1032 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 ZNF713Q8N859 430 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-204ENST00000427724 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 NOX5Q96PH1 765 aa11.65□□□□□ -0.54
TCOF1-204ENST00000427724 TRIM66O15016 1216 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 CTIFO43310 598 aaKnown RBP11.65□□□□□ -0.55
TCOF1-204ENST00000427724 GH1P01241 217 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 ATF7P17544 494 aaPredicted RBP11.65□□□□□ -0.55
TCOF1-204ENST00000427724 TFAMQ00059 246 aaKnown RBP11.65□□□□□ -0.55
TCOF1-204ENST00000427724 PPATQ06203 517 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 HLTFQ14527 1009 aaKnown RBP eCLIP11.65□□□□□ -0.55
TCOF1-204ENST00000427724 RHPN2Q8IUC4 686 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 EHBP1Q8NDI1 1231 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 ALS2CR12Q96Q35 445 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 SH2D3AQ9BRG2 576 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 EPC1Q9H2F5 836 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 ZNF302Q9NR11 478 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 MAN1B1Q9UKM7 699 aa11.65□□□□□ -0.55
TCOF1-204ENST00000427724 P4HA1P13674 534 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 VCAM1P19320 739 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 HTRA3P83110 453 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 VSTM4Q8IW00 320 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 OTUD6BQ8N6M0 293 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 GPR161Q8N6U8 529 aaKnown RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 DISC1Q9NRI5 854 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 PCDHB6Q9Y5E3 794 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 FAM205AQ6ZU69 1335 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 PRPF3O43395 683 aaKnown RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 MAP2K2P36507 400 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 CCZ1BP86790 482 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 CCZ1P86791 482 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 FAM167AQ96KS9 214 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 ASCC2Q9H1I8 757 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 TMEM260Q9NX78 707 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 SIGLEC1Q9BZZ2 1709 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 IPO5O00410 1097 aaKnown RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 ORC4O43929 436 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 LIG3P49916 1009 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 STAT5BP51692 787 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 KRT83P78385 493 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 PPARDQ03181 441 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 PPFIA1Q13136 1202 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 ALX1Q15699 326 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 APOBEC3HQ6NTF7 200 aaKnown RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 AFAP1L1Q8TED9 768 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 TBC1D22BQ9NU19 505 aa11.64□□□□□ -0.55
TCOF1-204ENST00000427724 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-204ENST00000427724 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms