RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NONOQ15233 471 aaKnown RBP eCLIP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 TTF1Q15361 905 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 MAP7D1Q3KQU3 841 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 PABPC1LQ4VXU2 614 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 C6orf118Q5T5N4 469 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 GRAMD4Q6IC98 578 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 BTNL9Q6UXG8 535 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 WAPLQ7Z5K2 1190 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 PIGWQ7Z7B1 504 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMEM110Q86TL2 294 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF598Q86UK7 904 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCDC84Q86UT8 332 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 AACSQ86V21 672 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 METTL16Q86W50 562 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPATA24Q86W54 205 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 ERICH1Q86X53 443 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 DZIP1Q86YF9 867 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPATA20Q8TB22 786 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 PIGOQ8TEQ8 1089 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CTNNBL1Q8WYA6 563 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 RAPGEF5Q92565 580 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 STMN2Q93045 179 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 FERMT2Q96AC1 680 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 LENG1Q96BZ8 264 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 ITPKCQ96DU7 683 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 RUNDC3BQ96NL0 473 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 HAPLN3Q96S86 360 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 UBAC1Q9BSL1 405 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 LRRC1Q9BTT6 524 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 MAK16Q9BXY0 300 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 EDEM3Q9BZQ6 932 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 ANKRD2Q9GZV1 360 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 TAOK3Q9H2K8 898 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 SLITRK6Q9H5Y7 841 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 USP40Q9NVE5 1235 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CYP39A1Q9NYL5 469 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 ANGPTL2Q9UKU9 493 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 BARX2Q9UMQ3 279 aaPredicted RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 CLIC4Q9Y696 253 aa6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 BZW2Q9Y6E2 419 aaKnown RBP6.11□□□□□ -1.43
VTI1BP4-201ENST00000427516 PIK3C2BO00750 1634 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 AGLP35573 1532 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 CRB1P82279 1406 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATP8B3O60423 1300 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PNPLA7Q6ZV29 1317 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 ARHGAP10A1A4S6 786 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMEM221A6NGB7 291 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 LGALS16A8MUM7 142 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 ECEL1O95672 775 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 HMOX1P09601 288 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCNB1P14635 433 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 CD46P15529 392 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 EIF4BP23588 611 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 GSTT1P30711 240 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 IARSP41252 1262 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 STAT6P42226 847 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 CD97P48960 835 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PEX5P50542 639 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 ALDH5A1P51649 535 aaPredicted RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 RAD23BP54727 409 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PLCB3Q01970 1234 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 GUCY2DQ02846 1103 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 UBXN1Q04323 297 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 BNIP1Q12981 228 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PAK1Q13153 545 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 ADAM9Q13443 819 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 ACVR2BQ13705 512 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 NDUFA5Q16718 116 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 KRT24Q2M2I5 525 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 KRT71Q3SY84 523 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCDC153Q494R4 210 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 CFAP157Q5JU67 520 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 C10orf76Q5T2E6 689 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 C6orf163Q5TEZ5 329 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 HAUS3Q68CZ6 603 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 NCCRP1Q6ZVX7 275 aaPredicted RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 RALYLQ86SE5 291 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 CREG2Q8IUH2 290 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 SH2D3CQ8N5H7 860 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 FAM160A2Q8N612 972 aaPredicted RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF280CQ8ND82 737 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PPP1R14CQ8TAE6 165 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 WDR60Q8WVS4 1066 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 LTV1Q96GA3 475 aaPredicted RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PBKQ96KB5 322 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PHACTR3Q96KR7 559 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 IFIH1Q9BYX4 1025 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 EHD4Q9H223 541 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 IL25Q9H293 177 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 EPB41L1Q9H4G0 881 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 SH2D4AQ9H788 454 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PARVBQ9HBI1 364 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 METTL14Q9HCE5 456 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 EPB41L5Q9HCM4 733 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 INTS9Q9NV88 658 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 PTTG2Q9NZH5 202 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 DLGAP2Q9P1A6 1054 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 SUCLA2Q9P2R7 463 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms