RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 NASPP49321 788 aaPredicted RBP27.15■■□□□ 1.94
APOE-202ENST00000425718 STK38Q15208 465 aa27.15■■□□□ 1.94
APOE-202ENST00000425718 FERMT2Q96AC1 680 aa27.15■■□□□ 1.94
APOE-202ENST00000425718 LENG1Q96BZ8 264 aaPredicted RBP27.15■■□□□ 1.94
APOE-202ENST00000425718 GPR20Q99678 358 aa27.15■■□□□ 1.94
APOE-202ENST00000425718 TMEM60Q9H2L4 133 aa27.15■■□□□ 1.94
APOE-202ENST00000425718 DKC1O60832 514 aaKnown RBP eCLIP27.14■■□□□ 1.94
APOE-202ENST00000425718 PSAPP07602 524 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 FXR2P51116 673 aaKnown RBP eCLIP27.14■■□□□ 1.942e-8■□□□□ 8.7
APOE-202ENST00000425718 ACTR2P61160 394 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 PDIA5Q14554 519 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 HSDL1Q3SXM5 330 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 MIER3Q7Z3K6 550 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 C4orf32Q8N8J7 132 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 TNPO1Q92973 898 aaKnown RBP27.14■■□□□ 1.94
APOE-202ENST00000425718 USP28Q96RU2 1077 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 KATNAL1Q9BW62 490 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 AZI2Q9H6S1 392 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 SAMM50Q9Y512 469 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 PCDHA10Q9Y5I2 948 aa27.14■■□□□ 1.94
APOE-202ENST00000425718 DDX39AO00148 427 aaKnown RBP27.13■■□□□ 1.93
APOE-202ENST00000425718 ATG7O95352 703 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 TMEM63BQ5T3F8 832 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 FAM160B1Q5W0V3 765 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 FAM173BQ6P4H8 233 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 ERMNQ8TAM6 284 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 NEK9Q8TD19 979 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 KCNG4Q8TDN1 519 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 SEZ6LQ9BYH1 1024 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 SCAND2PQ9GZW5 306 aaPredicted RBP27.13■■□□□ 1.93
APOE-202ENST00000425718 DISC1Q9NRI5 854 aa27.13■■□□□ 1.93
APOE-202ENST00000425718 ZNF215Q9UL58 517 aaPredicted RBP27.13■■□□□ 1.93
APOE-202ENST00000425718 SLC26A2P50443 739 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 SLC39A14Q15043 492 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 B3GNT9Q6UX72 402 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 UNC45AQ9H3U1 944 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 VAV3Q9UKW4 847 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 CLIC4Q9Y696 253 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 EMSYQ7Z589 1322 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 LOXHD1Q8IVV2 1947 aa27.12■■□□□ 1.93
APOE-202ENST00000425718 SCN10AQ9Y5Y9 1956 aa27.11■■□□□ 1.93
APOE-202ENST00000425718 PPP6R2O75170 966 aa27.11■■□□□ 1.93
APOE-202ENST00000425718 MYCNP04198 464 aaPredicted RBP27.11■■□□□ 1.93
APOE-202ENST00000425718 SUPT20HL2P0C7V6 817 aa27.11■■□□□ 1.93
APOE-202ENST00000425718 TCF7P36402 384 aaPredicted RBP27.11■■□□□ 1.93
APOE-202ENST00000425718 SP4Q02446 784 aa27.11■■□□□ 1.93
APOE-202ENST00000425718 AK8Q96MA6 479 aa27.11■■□□□ 1.93
APOE-202ENST00000425718 MTG1Q9BT17 334 aaPredicted RBP27.11■■□□□ 1.93
APOE-202ENST00000425718 SMARCAD1Q9H4L7 1026 aa27.11■■□□□ 1.93
APOE-202ENST00000425718 CTAGE5O15320 804 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 DNM1Q05193 864 aaKnown RBP27.1■■□□□ 1.93
APOE-202ENST00000425718 PTPAQ15257 358 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 EPHA7Q15375 998 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 KCNA10Q16322 511 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 HAUS3Q68CZ6 603 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 ABHD15Q6UXT9 468 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 LINC00301Q8NCQ3 95 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 GLT1D1Q96MS3 346 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 PHF24Q9UPV7 400 aa27.1■■□□□ 1.93
APOE-202ENST00000425718 GSTTP1A0A1W2PQM5 241 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 BACH1O14867 736 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 SPTLC2O15270 562 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 SLC26A4O43511 780 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 CHMP2AO43633 222 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 SORBS3O60504 671 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 LGR5O75473 907 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 CCNE2O96020 404 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 ASGR1P07306 291 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 MYL3P08590 195 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 NCLP19338 710 aaKnown RBP27.09■■□□□ 1.93
APOE-202ENST00000425718 LONP1P36776 959 aaKnown RBP27.09■■□□□ 1.93
APOE-202ENST00000425718 TECP42680 631 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 BEX3Q00994 111 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 CEBPZQ03701 1054 aaKnown RBP27.09■■□□□ 1.93
APOE-202ENST00000425718 CSPP1Q1MSJ5 1256 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 NCAPH2Q6IBW4 605 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 CCSAPQ6IQ19 270 aaPredicted RBP27.09■■□□□ 1.93
APOE-202ENST00000425718 PLPPR4Q7Z2D5 763 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 ATP6V0A1Q93050 837 aa27.09■■□□□ 1.93
APOE-202ENST00000425718 LGALS2P05162 132 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 ACLYP53396 1101 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 PURAQ00577 322 aaKnown RBP27.08■■□□□ 1.93
APOE-202ENST00000425718 FOXD4L6Q3SYB3 417 aaPredicted RBP27.08■■□□□ 1.93
APOE-202ENST00000425718 FOXD4L3Q6VB84 417 aaPredicted RBP27.08■■□□□ 1.93
APOE-202ENST00000425718 KRI1Q8N9T8 703 aaKnown RBP27.08■■□□□ 1.93
APOE-202ENST00000425718 AFAP1L1Q8TED9 768 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 GLG1Q92896 1179 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 UIMC1Q96RL1 719 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 BCAS3Q9H6U6 928 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 ERAP1Q9NZ08 941 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 TFIP11Q9UBB9 837 aaKnown RBP27.08■■□□□ 1.93
APOE-202ENST00000425718 LRWD1Q9UFC0 647 aa27.08■■□□□ 1.93
APOE-202ENST00000425718 SRPRBQ9Y5M8 271 aaKnown RBP27.08■■□□□ 1.93
APOE-202ENST00000425718 IGKV6D-21A0A0A0MT36 114 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 MYADML2A6NDP7 307 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 P4HBP07237 508 aaKnown RBP27.07■■□□□ 1.92
APOE-202ENST00000425718 MUTP22033 750 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 STAT5BP51692 787 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 SPIRE1Q08AE8 756 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 IGSF22Q8N9C0 903 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms