RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RTCBQ9Y3I0 505 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 GPR75-ASB3A0A0A6YYF3 556 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 GRID2IPA4D2P6 1211 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 NR1D1P20393 614 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 NT5C2P49902 561 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 MRPL12P52815 198 aaKnown RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 GPSM2P81274 684 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 GRAPQ13588 217 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 CDC37Q16543 378 aaPredicted RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 MEI1Q5TIA1 1274 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 GRAPLQ8TC17 118 aaPredicted RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 PSTPIP2Q9H939 334 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 JMJD4Q9H9V9 463 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 PPANQ9NQ55 473 aaKnown RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 PLAAQ9Y263 795 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 CAPN7Q9Y6W3 813 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 ROBO3Q96MS0 1386 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 GOLGA6L10A6NI86 522 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L10C9JJH3 530 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 MEIS1O00470 390 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 SLURP2P0DP57 97 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 NR2F2P24468 414 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 LSP1P33241 339 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 SKOR1P84550 965 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 PTK2Q05397 1052 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 ORC2Q13416 577 aaPredicted RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 ZCWPW2Q504Y3 356 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 DCAF17Q5H9S7 520 aaPredicted RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 SCFD1Q8WVM8 642 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 KAT2BQ92831 832 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 THRAP3Q9Y2W1 955 aaKnown RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 C6orf229H3BNL8 230 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 TULP1O00294 542 aaPredicted RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 RFC4P35249 363 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 ODF2Q5BJF6 829 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 B4GALNT4Q76KP1 1039 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 USP38Q8NB14 1042 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 IPO4Q8TEX9 1081 aaKnown RBP8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 CUL5Q93034 780 aa8.26□□□□□ -1.09
SMARCC1-202ENST00000425518 NHSL1Q5SYE7 1610 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 PNMA6FA0A0J9YX94 578 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 RBAK-RBAKDNI3L0D1 243 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 PPP1R11O60927 126 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 GNA14O95837 355 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 PLCG2P16885 1265 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 SMARCA1P28370 1054 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 MNAT1P51948 309 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 RHBDL3P58872 404 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 ASPRV1Q53RT3 343 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 PIK3R5Q8WYR1 880 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 SYN2Q92777 582 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 RPGRQ92834 1020 aaKnown RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 CEP63Q96MT8 703 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 INPP4AQ96PE3 977 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 A0A1B0GUL6 1792 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 E7EVH7 732 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 RIMBP2O15034 1052 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 PABPC4Q13310 644 aaKnown RBP eCLIP8.25□□□□□ -1.097e-9■■□□□ 13.3
SMARCC1-202ENST00000425518 MMS22LQ6ZRQ5 1243 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 ZNF571Q7Z3V5 609 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 DDX47Q9H0S4 455 aaKnown RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 ARMCX3Q9UH62 379 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 IRS2Q9Y4H2 1338 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 POTEFA5A3E0 1075 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 POTEIP0CG38 1075 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 TNFRSF8P28908 595 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 ERVK-9P63128 1117 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 GTF2IP78347 998 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 PPP4R3AQ6IN85 833 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 ALKBH5Q6P6C2 394 aaKnown RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 POTEEQ6S8J3 1075 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 CNBD1Q8NA66 436 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 WHAMMQ8TF30 809 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 ATP6V1G3Q96LB4 118 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 TRIM31Q9BZY9 425 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 NT5C3AQ9H0P0 336 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 CCNL1Q9UK58 526 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 PCDHGC5Q9Y5F6 944 aa8.25□□□□□ -1.09
SMARCC1-202ENST00000425518 SNED1Q8TER0 1413 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 A6NNZ2 444 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 BACH1O14867 736 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 CYP11B2P19099 503 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 CASP5P51878 434 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 IFT88Q13099 833 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 TUBB8Q3ZCM7 444 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 KDM7AQ6ZMT4 941 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 UBLCP1Q8WVY7 318 aaPredicted RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 CCT8L2Q96SF2 557 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 TAF1DQ9H5J8 278 aaPredicted RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 AIPL1Q9NZN9 384 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 GGA1Q9UJY5 639 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 GCOM1H8Y6P7 765 aaPredicted RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 MYO1FO00160 1098 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 KRIT1O00522 736 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 CLIC2O15247 247 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 SART1O43290 800 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms