RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TPH2Q8IWU9 490 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 VPS16Q9H269 839 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 AGO4Q9HCK5 861 aaKnown RBP29.49■■■□□ 2.31
LDB1-202ENST00000425280 LRRC41Q15345 812 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 EPHA7Q15375 998 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 ARHGEF16Q5VV41 709 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 CREBRFQ8IUR6 639 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 BHMT2Q9H2M3 363 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 PKD2L1Q9P0L9 805 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 PCDHA2Q9Y5H9 948 aa29.49■■■□□ 2.31
LDB1-202ENST00000425280 N4BP3O15049 544 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 DHX15O43143 795 aaKnown RBP29.48■■■□□ 2.31
LDB1-202ENST00000425280 MYCLP12524 364 aaPredicted RBP29.48■■■□□ 2.31
LDB1-202ENST00000425280 PPATQ06203 517 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 ANKRD13AQ8IZ07 590 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 GOLGA8FQ08AF8 430 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 GOLGA8DPQ0D2H9 430 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 MTMR1Q13613 665 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 GIT2Q14161 759 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 OTUD5Q96G74 571 aa29.48■■■□□ 2.31
LDB1-202ENST00000425280 TAF1DQ9H5J8 278 aaPredicted RBP29.48■■■□□ 2.31
LDB1-202ENST00000425280 LOC285556D6RIA3 1793 aa29.47■■■□□ 2.31
LDB1-202ENST00000425280 IRF6O14896 467 aa29.47■■■□□ 2.31
LDB1-202ENST00000425280 MUTP22033 750 aa29.47■■■□□ 2.31
LDB1-202ENST00000425280 ITGB3BPQ13352 177 aaPredicted RBP29.47■■■□□ 2.31
LDB1-202ENST00000425280 PLS1Q14651 629 aa29.47■■■□□ 2.31
LDB1-202ENST00000425280 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.47■■■□□ 2.31
LDB1-202ENST00000425280 ERO1BQ86YB8 467 aa29.47■■■□□ 2.31
LDB1-202ENST00000425280 ACAD9Q9H845 621 aa29.47■■■□□ 2.31
LDB1-202ENST00000425280 SCN4AP35499 1836 aa29.47■■■□□ 2.31
LDB1-202ENST00000425280 DDX39AO00148 427 aaKnown RBP29.46■■■□□ 2.31
LDB1-202ENST00000425280 TTLL12Q14166 644 aaPredicted RBP29.46■■■□□ 2.31
LDB1-202ENST00000425280 EAPPQ56P03 285 aaPredicted RBP29.46■■■□□ 2.31
LDB1-202ENST00000425280 HERC4Q5GLZ8 1057 aaPredicted RBP29.46■■■□□ 2.31
LDB1-202ENST00000425280 ILDR2Q71H61 639 aa29.46■■■□□ 2.31
LDB1-202ENST00000425280 MYOCDQ8IZQ8 938 aa29.46■■■□□ 2.31
LDB1-202ENST00000425280 PIGOQ8TEQ8 1089 aa29.46■■■□□ 2.31
LDB1-202ENST00000425280 FGFBP2Q9BYJ0 223 aa29.46■■■□□ 2.31
LDB1-202ENST00000425280 TBC1D7Q9P0N9 293 aa29.46■■■□□ 2.31
LDB1-202ENST00000425280 MAGEC2Q9UBF1 373 aaPredicted RBP29.46■■■□□ 2.31
LDB1-202ENST00000425280 A0A0G2JLL6 359 aaPredicted RBP29.46■■■□□ 2.31
LDB1-202ENST00000425280 PRRT2Q7Z6L0 340 aaPredicted RBP29.46■■■□□ 2.31
LDB1-202ENST00000425280 REEP2Q9BRK0 252 aa29.46■■■□□ 2.31
LDB1-202ENST00000425280 GADL1Q6ZQY3 521 aa29.45■■■□□ 2.31
LDB1-202ENST00000425280 EEF2KMTQ96G04 330 aa29.45■■■□□ 2.31
LDB1-202ENST00000425280 RUSC1Q9BVN2 902 aa29.45■■■□□ 2.31
LDB1-202ENST00000425280 WRAP73Q9P2S5 460 aaPredicted RBP29.45■■■□□ 2.31
LDB1-202ENST00000425280 SPDYE5A6NIY4 337 aa29.44■■■□□ 2.3
LDB1-202ENST00000425280 XRRA1Q6P2D8 792 aa29.44■■■□□ 2.3
LDB1-202ENST00000425280 TMX1Q9H3N1 280 aa29.44■■■□□ 2.3
LDB1-202ENST00000425280 A1CFQ9NQ94 594 aaKnown RBP29.44■■■□□ 2.3
LDB1-202ENST00000425280 CYP39A1Q9NYL5 469 aa29.44■■■□□ 2.3
LDB1-202ENST00000425280 LRRC63Q05C16 580 aa29.44■■■□□ 2.3
LDB1-202ENST00000425280 FAM114A1Q8IWE2 563 aa29.44■■■□□ 2.3
LDB1-202ENST00000425280 TC2NQ8N9U0 490 aa29.44■■■□□ 2.3
LDB1-202ENST00000425280 PROCA1Q8NCQ7 364 aaPredicted RBP29.44■■■□□ 2.3
LDB1-202ENST00000425280 A0A0G2JMZ2 1700 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 CCND2P30279 289 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 LBX2Q6XYB7 198 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 MIER3Q7Z3K6 550 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 VSIG10LQ86VR7 867 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 CNOT6LQ96LI5 555 aaKnown RBP29.43■■■□□ 2.3
LDB1-202ENST00000425280 ZHX3Q9H4I2 956 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 ITIH6Q6UXX5 1313 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 IQCA1LA6NCM1 817 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 CXCL11O14625 94 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 ZBTB39O15060 712 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 NRDCO43847 1150 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 NR3C2P08235 984 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 RINT1Q6NUQ1 792 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 FOXR2Q6PJQ5 311 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 CCDC112Q8NEF3 446 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 NEK9Q8TD19 979 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 NACC1Q96RE7 527 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 LXNQ9BS40 222 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 MAF1Q9H063 256 aa29.43■■■□□ 2.3
LDB1-202ENST00000425280 GRIN3BO60391 1043 aa29.42■■■□□ 2.3
LDB1-202ENST00000425280 BANK1Q8NDB2 785 aa29.42■■■□□ 2.3
LDB1-202ENST00000425280 NSUN6Q8TEA1 469 aaKnown RBP29.42■■■□□ 2.3
LDB1-202ENST00000425280 TBC1D22BQ9NU19 505 aa29.42■■■□□ 2.3
LDB1-202ENST00000425280 LGALS16A8MUM7 142 aa29.41■■■□□ 2.3
LDB1-202ENST00000425280 ADKP55263 362 aaKnown RBP29.41■■■□□ 2.3
LDB1-202ENST00000425280 TESPA1A2RU30 521 aaPredicted RBP29.41■■■□□ 2.3
LDB1-202ENST00000425280 ZCWPW2Q504Y3 356 aa29.41■■■□□ 2.3
LDB1-202ENST00000425280 CEP135Q66GS9 1140 aa29.41■■■□□ 2.3
LDB1-202ENST00000425280 TUBGCP2Q9BSJ2 902 aa29.41■■■□□ 2.3
LDB1-202ENST00000425280 BTBD7Q9P203 1132 aa29.41■■■□□ 2.3
LDB1-202ENST00000425280 KCNH4Q9UQ05 1017 aa29.41■■■□□ 2.3
LDB1-202ENST00000425280 PEX10O60683 326 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 UBXN1Q04323 297 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 PPIL2Q13356 520 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 C1orf186Q6ZWK4 172 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 SFR1Q86XK3 245 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 TMEM139Q8IV31 216 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 CHST13Q8NET6 341 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 SCFD1Q8WVM8 642 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 TSG101Q99816 390 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 RSPH10B2B2RC85 870 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 ATP9AO75110 1047 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 RSPH10BP0C881 870 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms