RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 USP17L6PQ6QN14 398 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 ZNF571Q7Z3V5 609 aaPredicted RBP15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 GRAPLQ8TC17 118 aaPredicted RBP15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 AP1M1Q9BXS5 423 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 NEUROG2Q9H2A3 272 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 IKZF4Q9H2S9 585 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 LRRC4CQ9HCJ2 640 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 SHTN1A0MZ66 631 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 USP17L10C9JJH3 530 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 KCNK3O14649 394 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 ERLIN2O94905 339 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 LDHCP07864 332 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 ECHS1P30084 290 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 ARSHQ5FYA8 562 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 MFSD14BQ5SR56 506 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 DPY19L2P1Q6NXN4 242 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 GBP6Q6ZN66 633 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 KCTD1Q719H9 257 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 ZNF804AQ7Z570 1209 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 RUBCNQ92622 972 aa15.6■□□□□ 0.09
TPM3P9-201ENST00000424846 UFL1O94874 794 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 LSP1P33241 339 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 KCNH2Q12809 1159 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 KCNV1Q6PIU1 500 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 GPBP1Q86WP2 473 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 PROM2Q8N271 834 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 USP38Q8NB14 1042 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 EDEM3Q9BZQ6 932 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 DDX4Q9NQI0 724 aaKnown RBP15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 PCDHA12Q9UN75 941 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 LEMD3Q9Y2U8 911 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 MARCH6O60337 910 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 PLA2G4BP0C869 781 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 FLT3P36888 993 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 CLK2P49760 499 aaKnown RBP15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 PSMC6P62333 389 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 PAK2Q13177 524 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 PSMD2Q13200 908 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 CDC37Q16543 378 aaPredicted RBP15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 POTEGQ6S5H5 508 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 ZNF287Q9HBT7 754 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 NRAPQ86VF7 1730 aa15.59■□□□□ 0.09
TPM3P9-201ENST00000424846 COL24A1Q17RW2 1714 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 MEIS1O00470 390 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 MED24O75448 989 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 TAL1P17542 331 aaPredicted RBP15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 CYP11B2P19099 503 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 ADAM9Q13443 819 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 GLE1Q53GS7 698 aaKnown RBP15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 GJB7Q6PEY0 223 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 IRF2BP2Q7Z5L9 587 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 RBM46Q8TBY0 533 aaKnown RBP15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 P2RX7Q99572 595 aaKnown RBP15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 RAB34Q9BZG1 259 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 CENPHQ9H3R5 247 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 PLAAQ9Y263 795 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 ARFGEF1Q9Y6D6 1849 aa15.58■□□□□ 0.09
TPM3P9-201ENST00000424846 SMARCA1P28370 1054 aa15.58■□□□□ 0.08
TPM3P9-201ENST00000424846 HOXD13P35453 343 aa15.58■□□□□ 0.08
TPM3P9-201ENST00000424846 UAP1Q16222 522 aaPredicted RBP15.58■□□□□ 0.08
TPM3P9-201ENST00000424846 FAM107BQ9H098 131 aa15.58■□□□□ 0.08
TPM3P9-201ENST00000424846 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.08
TPM3P9-201ENST00000424846 BACH1O14867 736 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 ITGA4P13612 1032 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 NR1D1P20393 614 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 HPDP32754 393 aaPredicted RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 RFC4P35249 363 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 ORC2Q13416 577 aaPredicted RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 ASIC2Q16515 512 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 CEP85LQ5SZL2 805 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 PPP4R3AQ6IN85 833 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 IPO4Q8TEX9 1081 aaKnown RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 SYN2Q92777 582 aaPredicted RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 RTCBQ9Y3I0 505 aaKnown RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 MYO1FO00160 1098 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 SNHG28P0DPA3 235 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 HLTFQ14527 1009 aaKnown RBP eCLIP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 KDM7AQ6ZMT4 941 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 MAATS1Q7Z4T9 603 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 MXD3Q9BW11 206 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 DDX47Q9H0S4 455 aaKnown RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 AIPL1Q9NZN9 384 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 TMEM59LQ9UK28 342 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 MYBP10242 640 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 NR2F2P24468 414 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 POLD1P28340 1107 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 GTF2A1P52655 376 aaPredicted RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 HDLBPQ00341 1268 aaKnown RBP15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 ZNF543Q08ER8 600 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 NAA35Q5VZE5 725 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 TSKSQ9UJT2 592 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 DAGLAQ9Y4D2 1042 aa15.57■□□□□ 0.08
TPM3P9-201ENST00000424846 CEP104O60308 925 aa15.56■□□□□ 0.08
TPM3P9-201ENST00000424846 ZBTB48P10074 688 aaPredicted RBP15.56■□□□□ 0.08
TPM3P9-201ENST00000424846 INPP5BP32019 993 aa15.56■□□□□ 0.08
TPM3P9-201ENST00000424846 SNAP25P60880 206 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms