RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 OBP2AQ9NY56 170 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 IMPACTQ9P2X3 320 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 PFDN2Q9UHV9 154 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 ACSL6Q9UKU0 697 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 HDAC9Q9UKV0 1011 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 NOB1Q9ULX3 412 aaKnown RBP4.48□□□□□ -1.69
SF3B1-205ENST00000424674 CTDP1Q9Y5B0 961 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-205ENST00000424674 LTBP3Q9NS15 1303 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 A0A1W2PRQ8 180 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 KLRG2A4D1S0 409 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 TTC36A6NLP5 189 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 GSG1L2A8MUP6 293 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 NUDT19A8MXV4 375 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 GOLIM4O00461 696 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 FIBPO43427 364 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 DIAPH1O60610 1272 aaKnown RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 GSTM1P09488 218 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 ITGA4P13612 1032 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 CCT5P48643 541 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 CASP7P55210 303 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 ZNF445P59923 1031 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 RBM10P98175 930 aaKnown RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 PABPC4Q13310 644 aaKnown RBP eCLIP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 RAB3GAP1Q15042 981 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 C21orf62-AS1Q17RA5 79 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 GLIPR1L2Q4G1C9 344 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 ANKRD39Q53RE8 183 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 NOL9Q5SY16 702 aaKnown RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 RNF219Q5W0B1 726 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 LARP1BQ659C4 914 aaKnown RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 IL31Q6EBC2 164 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 CYP2R1Q6VVX0 501 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 TOGARAM2Q6ZUX3 1019 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 TMC6Q7Z403 805 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 ZSCAN30Q86W11 494 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 TTC30BQ8N4P2 665 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 UBR7Q8N806 425 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 TMEM52Q8NDY8 209 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 ATXN2LQ8WWM7 1075 aaKnown RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 BRF1Q92994 677 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 TRMT2BQ96GJ1 504 aaKnown RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 JMJD8Q96S16 334 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 SLC12A9Q9BXP2 914 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 GP6Q9HCN6 339 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 PLCB1Q9NQ66 1216 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 CWC25Q9NXE8 425 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-205ENST00000424674 SLC5A4Q9NY91 659 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 KLHL14Q9P2G3 628 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 PGAP2Q9UHJ9 254 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 FHOD1Q9Y613 1164 aa4.47□□□□□ -1.69
SF3B1-205ENST00000424674 VSTM5A8MXK1 200 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 RBP3P10745 1247 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 TYRP1P17643 537 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 BMP7P18075 431 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 GIPRP48546 466 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 CDR1P51861 262 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 DDX10Q13206 875 aaKnown RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 MTMR1Q13613 665 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 SLC9A5Q14940 896 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 ALDH1L2Q3SY69 923 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 CCDC184Q52MB2 194 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 CCDC92Q53HC0 331 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 JAKMIP3Q5VZ66 844 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 HLA-DQA1Q5Y7H0 255 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 PDXDC1Q6P996 788 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 DDX46Q7L014 1031 aaKnown RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 ANKRD23Q86SG2 305 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 SUGP1Q8IWZ8 645 aaKnown RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 FIBCD1Q8N539 461 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 FAM169BQ8N8A8 192 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 GJA10Q969M2 543 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 TTC17Q96AE7 1141 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 CDK5RAP3Q96JB5 506 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 ZCCHC4Q9H5U6 513 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 RETREG1Q9H6L5 497 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 PARD6AQ9NPB6 346 aa4.46□□□□□ -1.7
SF3B1-205ENST00000424674 LUC7LQ9NQ29 371 aaKnown RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 C9orf78Q9NZ63 289 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 LUC7L2Q9Y383 392 aaKnown RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 SF3B6Q9Y3B4 125 aaKnown RBP4.46□□□□□ -1.7
SF3B1-205ENST00000424674 A0A1W2PQ27 194 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 A0A1W2PQ64 194 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 A0A1W2PQC6 194 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 A0A1W2PQD8 194 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 A0A1W2PQH9 124 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 FGF10O15520 208 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 ABLIM3O94929 683 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 GJB6O95452 261 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 EYA4O95677 639 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 CD3EP07766 207 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 HOXA5P20719 270 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 CD247P20963 164 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 RRM1P23921 792 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 NOP2P46087 812 aaKnown RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 AFF3P51826 1226 aaKnown RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 CTSWP56202 376 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 GJA9P57773 515 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 ZNF280AP59817 542 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 SAFBQ15424 915 aaKnown RBP eCLIP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 LONRF1Q17RB8 773 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms