RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 KAT2BQ92831 832 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 MS4A14Q96JA4 679 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 NCAPGQ9BPX3 1015 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 EHD4Q9H223 541 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 KCTD10Q9H3F6 313 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 SLITRK6Q9H5Y7 841 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 ACTR5Q9H9F9 607 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-204ENST00000424143 BIN2Q9UBW5 565 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-204ENST00000424143 FAM153AQ9UHL3 310 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 TTC7AQ9ULT0 858 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-204ENST00000424143 AHDC1Q5TGY3 1603 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-204ENST00000424143 GOLGA6L10A6NI86 522 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 H0YGN5 161 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 POLR2FP61218 127 aaKnown RBP16.7■□□□□ 0.26
C9orf3-204ENST00000424143 KLHL30Q0D2K2 578 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 KIAA0753Q2KHM9 967 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 DYMQ7RTS9 669 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 ZNF804AQ7Z570 1209 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 NLRP14Q86W24 1093 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 TGFBRAP1Q8WUH2 860 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 CABS1Q96KC9 395 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 CCT8L2Q96SF2 557 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 KRT12Q99456 494 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 TANGO6Q9C0B7 1094 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 EHD2Q9NZN4 543 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
C9orf3-204ENST00000424143 DAAM1Q9Y4D1 1078 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 NFS1Q9Y697 457 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 A0A087X0T9 212 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 PNMA6FA0A0J9YX94 578 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 CETN3O15182 167 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 RAD51CO43502 376 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 SLC37A4O43826 429 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 KRT14P02533 472 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 FAM228BP0C875 321 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 GOLGA8HP0CJ92 632 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 SMTNP53814 917 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 MOXD1Q6UVY6 613 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 IRF2BP2Q7Z5L9 587 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 ANKRD13CQ8N6S4 541 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 LRRC57Q8N9N7 239 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 MBOAT7Q96N66 472 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 SMARCAL1Q9NZC9 954 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 SUCLA2Q9P2R7 463 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-204ENST00000424143 TRAF3IP3Q9Y228 551 aa16.7■□□□□ 0.26
C9orf3-204ENST00000424143 CYP3A7-CYP3A51PA0A087WV96 503 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 IGKV6D-41A0A0C4DH26 115 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 C5orf60A6NFR6 353 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 ANKRD65E5RJM6 399 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-204ENST00000424143 MYZAPP0CAP1 466 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 PDHBP11177 359 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 CYP3A7P24462 503 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
C9orf3-204ENST00000424143 CLUL1Q15846 466 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 KCNK18Q7Z418 384 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 TXNRD3Q86VQ6 643 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 SYCE1Q8N0S2 351 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 IFT81Q8WYA0 676 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 NLRC4Q9NPP4 1024 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 GAKO14976 1311 aa16.69■□□□□ 0.26
C9orf3-204ENST00000424143 GTPBP10A4D1E9 387 aaKnown RBP16.68■□□□□ 0.26
C9orf3-204ENST00000424143 ECHS1P30084 290 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 SETQ01105 290 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-204ENST00000424143 ACTN3Q08043 901 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-204ENST00000424143 KCNV1Q6PIU1 500 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 HAS1Q92839 578 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 CENPTQ96BT3 561 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 ZBTB9Q96C00 473 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 NUDT12Q9BQG2 462 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.68■□□□□ 0.267e-7■■■□□ 15.2
C9orf3-204ENST00000424143 TMEM260Q9NX78 707 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 PLAAQ9Y263 795 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
C9orf3-204ENST00000424143 PGRMC1O00264 195 aaKnown RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 RPS6KA4O75676 772 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 TDP2O95551 362 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 FTCDO95954 541 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 MAATS1Q7Z4T9 603 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 FMNL3Q8IVF7 1028 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 SH2D3CQ8N5H7 860 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 PSMB7Q99436 277 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 METTL14Q9HCE5 456 aaKnown RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 FAM114A2Q9NRY5 505 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 DDX25Q9UHL0 483 aaKnown RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 SLC12A6Q9UHW9 1150 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 957 ms