RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PLA2G4DQ86XP0 818 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 NECAB1Q8N987 351 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 RASGRP4Q8TDF6 673 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 SEPT1Q8WYJ6 367 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 C16orf70Q9BSU1 422 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 BCAS3Q9H6U6 928 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 ORC3Q9UBD5 711 aaPredicted RBP12.45□□□□□ -0.42
USP49-204ENST00000423567 HDAC6Q9UBN7 1215 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 SLC9A2Q9UBY0 812 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 GTF2IRD1Q9UHL9 959 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 TCEAL9Q9UHQ7 104 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 NFASCO94856 1347 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 C17orf102A2RUQ5 167 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 HAS3O00219 553 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 ARP10275 920 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 CSF2RAP15509 400 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 TCF7P36402 384 aaPredicted RBP12.44□□□□□ -0.42
USP49-204ENST00000423567 CCL23P55773 120 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 SHHQ15465 462 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 LRIT3Q3SXY7 679 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 PSRC1Q6PGN9 363 aaPredicted RBP12.44□□□□□ -0.42
USP49-204ENST00000423567 RPUSD2Q8IZ73 545 aaKnown RBP12.44□□□□□ -0.42
USP49-204ENST00000423567 BLIDQ8IZY5 108 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 DAGLBQ8NCG7 672 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 CYP2W1Q8TAV3 490 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 GLG1Q92896 1179 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
USP49-204ENST00000423567 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 AGO4Q9HCK5 861 aaKnown RBP12.44□□□□□ -0.42
USP49-204ENST00000423567 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 LIMCH1Q9UPQ0 1083 aa12.44□□□□□ -0.42
USP49-204ENST00000423567 FAM86B1E9PN63 330 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 FAM86B2P0C5J1 330 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 GNAT1P11488 350 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
USP49-204ENST00000423567 USP11P51784 963 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 RABEP1Q15276 862 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 C9orf50Q5SZB4 431 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 GDF6Q6KF10 455 aaPredicted RBP12.43□□□□□ -0.42
USP49-204ENST00000423567 KRT25Q7Z3Z0 450 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
USP49-204ENST00000423567 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 CRYGNQ8WXF5 182 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 TNPO1Q92973 898 aaKnown RBP12.43□□□□□ -0.42
USP49-204ENST00000423567 ZSCAN31Q96LW9 406 aaPredicted RBP12.43□□□□□ -0.42
USP49-204ENST00000423567 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 ZNF577Q9BSK1 485 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 MTIF3Q9H2K0 278 aaKnown RBP12.43□□□□□ -0.42
USP49-204ENST00000423567 SMARCAD1Q9H4L7 1026 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 IL23AQ9NPF7 189 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 TBC1D22BQ9NU19 505 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 TRIOBPQ9H2D6 2365 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 SCN10AQ9Y5Y9 1956 aa12.43□□□□□ -0.42
USP49-204ENST00000423567 UMODL1Q5DID0 1318 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 DNAH12Q6ZR08 3092 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 LTBP2Q14767 1821 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 CCDC194A0A1B0GVG4 234 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 GSTTP1A0A1W2PQM5 241 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 DDX39AO00148 427 aaKnown RBP12.42□□□□□ -0.42
USP49-204ENST00000423567 IPO5O00410 1097 aaKnown RBP12.42□□□□□ -0.42
USP49-204ENST00000423567 ADAMTS3O15072 1205 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 ST18O60284 1047 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 LARGE1O95461 756 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 CTDNEP1O95476 244 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 PFKMP08237 780 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 CIITAP33076 1130 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 RFC2P35250 354 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 EPHB4P54760 987 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 PTK7Q13308 1070 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 TRIM29Q14134 588 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 NONOQ15233 471 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP49-204ENST00000423567 PRR16Q569H4 304 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 TBCKQ8TEA7 893 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 AFAP1L1Q8TED9 768 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 ATP6V0A1Q93050 837 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 WNT8AQ9H1J5 351 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
USP49-204ENST00000423567 ERAP1Q9NZ08 941 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 KCNJ14Q9UNX9 436 aa12.42□□□□□ -0.42
USP49-204ENST00000423567 EMSYQ7Z589 1322 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 IGLV3-22A0A075B6J6 115 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
USP49-204ENST00000423567 FGBP02675 491 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 ACRP10323 421 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 ACTR2P61160 394 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 ITGB3BPQ13352 177 aaPredicted RBP12.41□□□□□ -0.42
USP49-204ENST00000423567 FAM160B1Q5W0V3 765 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
USP49-204ENST00000423567 SCLYQ96I15 445 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP49-204ENST00000423567 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
USP49-204ENST00000423567 NRCAMQ92823 1304 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
USP49-204ENST00000423567 BACH1O14867 736 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 ACTN1P12814 892 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms