RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 CARMIL3Q8ND23 1372 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
LINC00458-201ENST00000423442 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 SLC22A31A6NKX4 558 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 HRKO00198 91 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 N4BP3O15049 544 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 TLR3O15455 904 aaKnown RBP7.31□□□□□ -1.24
LINC00458-201ENST00000423442 SYPP08247 313 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 SNRPA1P09661 255 aaKnown RBP7.31□□□□□ -1.24
LINC00458-201ENST00000423442 CYP19A1P11511 503 aaPredicted RBP7.31□□□□□ -1.24
LINC00458-201ENST00000423442 RIPK4P57078 832 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 LMOD3Q0VAK6 560 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 MPP2Q14168 576 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 NFE2L2Q16236 605 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 BBS9Q3SYG4 887 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 ZNF655Q8N720 491 aaPredicted RBP7.31□□□□□ -1.24
LINC00458-201ENST00000423442 FEZF2Q8TBJ5 459 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 ZNF622Q969S3 477 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00458-201ENST00000423442 RSRP1Q9BUV0 290 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 TAF1DQ9H5J8 278 aaPredicted RBP7.31□□□□□ -1.24
LINC00458-201ENST00000423442 NARFQ9UHQ1 456 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 MINPP1Q9UNW1 487 aa7.31□□□□□ -1.24
LINC00458-201ENST00000423442 SOS1Q07889 1333 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-201ENST00000423442 WDR33Q9C0J8 1336 aaKnown RBP7.3□□□□□ -1.24
LINC00458-201ENST00000423442 ANKRD31Q8N7Z5 1873 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 SCN4AP35499 1836 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 RASSF10A6NK89 507 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 SASH1O94885 1247 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 PNLIPP16233 465 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 GARTP22102 1010 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
LINC00458-201ENST00000423442 CDR1P51861 262 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 RTP1P59025 263 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 YBX1P67809 324 aaKnown RBP7.3□□□□□ -1.24
LINC00458-201ENST00000423442 RNF4P78317 190 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 MAP2K1Q02750 393 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-201ENST00000423442 NBPF12Q5TAG4 269 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-201ENST00000423442 CRELD1Q96HD1 420 aa7.3□□□□□ -1.24
LINC00458-201ENST00000423442 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-201ENST00000423442 IQCA1LA6NCM1 817 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 ANP32CO43423 234 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 PRAMEF1O95521 474 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 PDIA4P13667 645 aaKnown RBP7.29□□□□□ -1.24
LINC00458-201ENST00000423442 RAG1P15918 1043 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 DCTN1Q14203 1278 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 SKOR2Q2VWA4 1001 aaPredicted RBP7.29□□□□□ -1.24
LINC00458-201ENST00000423442 TMEFF1Q8IYR6 380 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 ZDHHC14Q8IZN3 488 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 RUNDC1Q96C34 613 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 TAOK3Q9H2K8 898 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 CACNA1SQ13698 1873 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 COL15A1P39059 1388 aa7.29□□□□□ -1.24
LINC00458-201ENST00000423442 COL11A2P13942 1736 aaPredicted RBP7.29□□□□□ -1.24
LINC00458-201ENST00000423442 COL3A1P02461 1466 aaPredicted RBP7.29□□□□□ -1.24
LINC00458-201ENST00000423442 LTBP3Q9NS15 1303 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 IRS4O14654 1257 aaPredicted RBP7.28□□□□□ -1.24
LINC00458-201ENST00000423442 IL6STP40189 918 aaPredicted RBP7.28□□□□□ -1.24
LINC00458-201ENST00000423442 DBX2Q6ZNG2 339 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 CNTROBQ8N137 903 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 SYT8Q8NBV8 401 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 CXorf38Q8TB03 319 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 MZB1Q8WU39 189 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 ZNF512BQ96KM6 892 aaPredicted RBP7.28□□□□□ -1.24
LINC00458-201ENST00000423442 PLEKHF1Q96S99 279 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 PRDM14Q9GZV8 571 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 PRKRIP1Q9H875 184 aaPredicted RBP7.28□□□□□ -1.24
LINC00458-201ENST00000423442 MIS18AQ9NYP9 233 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 KLHL14Q9P2G3 628 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 ABT1Q9ULW3 272 aaKnown RBP7.28□□□□□ -1.24
LINC00458-201ENST00000423442 ZNF652Q9Y2D9 606 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 ZBTB1Q9Y2K1 713 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 LAS1LQ9Y4W2 734 aaKnown RBP7.28□□□□□ -1.24
LINC00458-201ENST00000423442 PCDHB14Q9Y5E9 798 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 USP16Q9Y5T5 823 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 SLX4Q8IY92 1834 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 DLG5Q8TDM6 1919 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 CEMIPQ8WUJ3 1361 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 HEG1Q9ULI3 1381 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 ADAMTSL1Q8N6G6 1762 aa7.28□□□□□ -1.24
LINC00458-201ENST00000423442 FADS2P1A8MWK0 482 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 A1BGP04217 495 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 EPHX2P34913 555 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 TMPOP42166 694 aaKnown RBP7.27□□□□□ -1.25
LINC00458-201ENST00000423442 ERVFRD-1P60508 538 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 CALD1Q05682 793 aaKnown RBP7.27□□□□□ -1.25
LINC00458-201ENST00000423442 GRM1Q13255 1194 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 CNKSR3Q6P9H4 555 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 CCDC146Q8IYE0 955 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 CAPNS2Q96L46 248 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 BRIP1Q9BX63 1249 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.27□□□□□ -1.25
LINC00458-201ENST00000423442 BRMS1Q9HCU9 246 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 BABAM1Q9NWV8 329 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 HACL1Q9UJ83 578 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 GPR55Q9Y2T6 319 aaPredicted RBP7.27□□□□□ -1.25
LINC00458-201ENST00000423442 ZNF541Q9H0D2 1346 aa7.27□□□□□ -1.25
LINC00458-201ENST00000423442 KCNQ3O43525 872 aa7.26□□□□□ -1.25
LINC00458-201ENST00000423442 EIF5P55010 431 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms