RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 GUCY1A3Q02108 690 aa6.23□□□□□ -1.41
LINC00397-201ENST00000422074 UBXN11Q5T124 520 aa6.23□□□□□ -1.41
LINC00397-201ENST00000422074 MTDHQ86UE4 582 aaKnown RBP6.23□□□□□ -1.41
LINC00397-201ENST00000422074 NLGN4XQ8N0W4 816 aa6.23□□□□□ -1.41
LINC00397-201ENST00000422074 THAP3Q8WTV1 239 aaPredicted RBP6.23□□□□□ -1.41
LINC00397-201ENST00000422074 ZCCHC14Q8WYQ9 949 aaKnown RBP6.23□□□□□ -1.41
LINC00397-201ENST00000422074 MBD6Q96DN6 1003 aa6.23□□□□□ -1.41
LINC00397-201ENST00000422074 DLL4Q9NR61 685 aa6.23□□□□□ -1.41
LINC00397-201ENST00000422074 RBPJLQ9UBG7 517 aa6.23□□□□□ -1.41
LINC00397-201ENST00000422074 SRPK3Q9UPE1 567 aa6.23□□□□□ -1.41
LINC00397-201ENST00000422074 AMY2AP04746 511 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 CELA3BP08861 270 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 AMY2BP19961 511 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 BUD31P41223 144 aaPredicted RBP6.22□□□□□ -1.41
LINC00397-201ENST00000422074 LACTBP83111 547 aaPredicted RBP6.22□□□□□ -1.41
LINC00397-201ENST00000422074 C2orf27AQ580R0 203 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 MCTP2Q6DN12 878 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 PKN3Q6P5Z2 889 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 TMC5Q6UXY8 1006 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 ZSWIM2Q8NEG5 633 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 LCORQ96JN0 433 aaPredicted RBP6.22□□□□□ -1.41
LINC00397-201ENST00000422074 RBM15Q96T37 977 aaKnown RBP eCLIP6.22□□□□□ -1.41
LINC00397-201ENST00000422074 OSBPL2Q9H1P3 480 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 PCDHA9Q9Y5H5 950 aa6.22□□□□□ -1.41
LINC00397-201ENST00000422074 ZNF561-AS1K7EIQ3 104 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 GSTA4O15217 222 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 CRTAMO95727 393 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 ENO2P09104 434 aaPredicted RBP6.21□□□□□ -1.42
LINC00397-201ENST00000422074 CNR2P34972 360 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 EFEMP1Q12805 493 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 PRAMEF18Q5VWM3 479 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 CD276Q5ZPR3 534 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 VASNQ6EMK4 673 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 ARHGAP36Q6ZRI8 547 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 FERMT3Q86UX7 667 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 FAM124AQ86V42 546 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 LGI4Q8N135 537 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 LILRB2Q8N423 598 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 PMFBP1Q8TBY8 1022 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 DDX1Q92499 740 aaKnown RBP6.21□□□□□ -1.42
LINC00397-201ENST00000422074 MRPL4Q9BYD3 311 aaKnown RBP6.21□□□□□ -1.42
LINC00397-201ENST00000422074 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 SLC52A2Q9HAB3 445 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 CBLCQ9ULV8 474 aa6.21□□□□□ -1.42
LINC00397-201ENST00000422074 ZNF839A8K0R7 811 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 MAN2B1O00754 1011 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 ITGB3P05106 788 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 CKMP06732 381 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 PYGMP11217 842 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 FIGNQ5HY92 759 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 BORAQ6PGQ7 559 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 OSTM1Q86WC4 334 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 SLC7A14Q8TBB6 771 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 ZSWIM3Q96MP5 696 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 CD244Q9BZW8 370 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 L2HGDHQ9H9P8 463 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 CROTQ9UKG9 612 aa6.2□□□□□ -1.42
LINC00397-201ENST00000422074 CDK11AQ9UQ88 783 aaPredicted RBP6.2□□□□□ -1.42
LINC00397-201ENST00000422074 FAM90A27PA6NNH2 459 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 KLHL18O94889 574 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 KNG1P01042 644 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 PDE6AP16499 860 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 GJA4P35212 333 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 PFKPQ01813 784 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 DBPQ10586 325 aaPredicted RBP6.19□□□□□ -1.42
LINC00397-201ENST00000422074 NFE2L2Q16236 605 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 FAM47CQ5HY64 1035 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 HHIPL2Q6UWX4 724 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 KLHL36Q8N4N3 616 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 IGDCC4Q8TDY8 1250 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 SCLYQ96I15 445 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 DNAJC2Q99543 621 aaKnown RBP6.19□□□□□ -1.42
LINC00397-201ENST00000422074 TMEM168Q9H0V1 697 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 SMURF1Q9HCE7 757 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 KCND1Q9NSA2 647 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 CATSPERZQ9NTU4 200 aa6.19□□□□□ -1.42
LINC00397-201ENST00000422074 B4GALT3O60512 393 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 CLASP2O75122 1294 aaKnown RBP6.18□□□□□ -1.42
LINC00397-201ENST00000422074 PLATP00750 562 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 KCNA6P17658 529 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 PTPN1P18031 435 aaKnown RBP6.18□□□□□ -1.42
LINC00397-201ENST00000422074 JAM2P57087 298 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 SMAD2Q15796 467 aaKnown RBP6.18□□□□□ -1.42
LINC00397-201ENST00000422074 CRY1Q16526 586 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 SKIDA1Q1XH10 827 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 TBC1D10BQ4KMP7 808 aaPredicted RBP6.18□□□□□ -1.42
LINC00397-201ENST00000422074 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 MAGEB10Q96LZ2 347 aaPredicted RBP6.18□□□□□ -1.42
LINC00397-201ENST00000422074 BDH2Q9BUT1 245 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 SSBP3Q9BWW4 388 aaPredicted RBP6.18□□□□□ -1.42
LINC00397-201ENST00000422074 CELF4Q9BZC1 486 aaKnown RBP6.18□□□□□ -1.42
LINC00397-201ENST00000422074 NDOR1Q9UHB4 597 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 ADAM29Q9UKF5 820 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 INVSQ9Y283 1065 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 PTCH2Q9Y6C5 1203 aa6.18□□□□□ -1.42
LINC00397-201ENST00000422074 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
LINC00397-201ENST00000422074 NPTXRO95502 500 aa6.17□□□□□ -1.42
LINC00397-201ENST00000422074 IL18BPO95998 194 aa6.17□□□□□ -1.42
LINC00397-201ENST00000422074 C4BPAP04003 597 aaKnown RBP6.17□□□□□ -1.42
LINC00397-201ENST00000422074 CYP1A1P04798 512 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms