RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 NAPAP54920 295 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 DEFB103AP81534 67 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 CNKSR3Q6P9H4 555 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 SPRED2Q7Z698 418 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 TMCO2Q7Z6W1 182 aaPredicted RBP12.66□□□□□ -0.38
SSBP3-206ENST00000420121 HERC6Q8IVU3 1022 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 CYP2W1Q8TAV3 490 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 BRF1Q92994 677 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 PGBD1Q96JS3 809 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
SSBP3-206ENST00000420121 PRRC2BQ5JSZ5 2229 aaKnown RBP12.66□□□□□ -0.38
SSBP3-206ENST00000420121 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 PARNO95453 639 aaKnown RBP12.65□□□□□ -0.38
SSBP3-206ENST00000420121 TCF7P36402 384 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-206ENST00000420121 SP4Q02446 784 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 MTMR1Q13613 665 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 NTRK3Q16288 839 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 PKN1Q16512 942 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 UTP14CQ5TAP6 766 aaKnown RBP12.65□□□□□ -0.38
SSBP3-206ENST00000420121 PPP2R2DQ66LE6 453 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-206ENST00000420121 GIMAP8Q8ND71 665 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-206ENST00000420121 LMBR1Q8WVP7 490 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 CRYGNQ8WXF5 182 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 ATP6V0A1Q93050 837 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 PCYT2Q99447 389 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 MXRA8Q9BRK3 442 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 COL25A1Q9BXS0 654 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-206ENST00000420121 ANO3Q9BYT9 981 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 SETD4Q9NVD3 440 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 TMEM260Q9NX78 707 aa12.65□□□□□ -0.38
SSBP3-206ENST00000420121 TTC28Q96AY4 2481 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 SMCO2A6NFE2 343 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 EPOPA6NHQ4 379 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 MAFGO15525 162 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 ARP10275 920 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 SREBF1P36956 1147 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 THPOP40225 353 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 METAP2P50579 478 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■□□ 15.4
SSBP3-206ENST00000420121 ADCY7P51828 1080 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 EVCP57679 992 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 TAP1Q03518 808 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 PFKFB3Q16875 520 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-206ENST00000420121 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 CDHR1Q96JP9 859 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 GAS2L1Q99501 681 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-206ENST00000420121 PRDM6Q9NQX0 595 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 KCNH7Q9NS40 1196 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 PKD2L1Q9P0L9 805 aa12.64□□□□□ -0.39
SSBP3-206ENST00000420121 NLRC5Q86WI3 1866 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 ABHD14A-ACY1A0A1B0GW23 586 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 LCHNA4D1U4 455 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 RSPH10B2B2RC85 870 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 EPB41L2O43491 1005 aaKnown RBP12.63□□□□□ -0.39
SSBP3-206ENST00000420121 LGR5O75473 907 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 REC8O95072 547 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 RSPH10BP0C881 870 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 SCG2P13521 617 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 ITGB3BPQ13352 177 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-206ENST00000420121 PLEKHG4Q58EX7 1191 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 DBF4BQ8NFT6 615 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 SEPT1Q8WYJ6 367 aa12.63□□□□□ -0.39
SSBP3-206ENST00000420121 ZNF215Q9UL58 517 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-206ENST00000420121 MYH9P35579 1960 aaKnown RBP12.63□□□□□ -0.39
SSBP3-206ENST00000420121 NFASCO94856 1347 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 EMSYQ7Z589 1322 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 IGLV3-22A0A075B6J6 115 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 RFXAPO00287 272 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 MEIS1O00470 390 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 PRPF3O43395 683 aaKnown RBP12.62□□□□□ -0.39
SSBP3-206ENST00000420121 CAND2O75155 1236 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 GJB5O95377 273 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 FOSP01100 380 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-206ENST00000420121 KCNJ6P48051 423 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 AP3B2Q13367 1082 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 TOB2Q14106 344 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-206ENST00000420121 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 FAM26DQ5JW98 314 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 MARCH8Q5T0T0 291 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSBP3-206ENST00000420121 RUFY4Q6ZNE9 571 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 IFNLR1Q8IU57 520 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-206ENST00000420121 PHKBQ93100 1093 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 CERS4Q9HA82 394 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
SSBP3-206ENST00000420121 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-206ENST00000420121 XIRP2A4UGR9 3374 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 EVPLQ92817 2033 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 NRCAMQ92823 1304 aa12.62□□□□□ -0.39
SSBP3-206ENST00000420121 COL4A6Q14031 1691 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 CCDC196A0A1B0GTZ2 297 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 MBLAC1A4D2B0 266 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-206ENST00000420121 FAM86B1E9PN63 330 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 EDIL3O43854 480 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms