RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 KIAA0754O94854 1291 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 CEP85LQ5SZL2 805 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 FBXW10Q5XX13 1052 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 EDEM3Q9BZQ6 932 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 GDF3Q9NR23 364 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 RNF14Q9UBS8 474 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 MPHOSPH10O00566 681 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 AKR1B1P15121 316 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 ORC2Q13416 577 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 RPS6KA1Q15418 735 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 TMEM119Q4V9L6 283 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 TCERG1LQ5VWI1 586 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 HAS1Q92839 578 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 AP1M1Q9BXS5 423 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 CD209Q9NNX6 404 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 BCCIPQ9P287 314 aaKnown RBP eCLIP16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-203ENST00000419007 TRIM37O94972 964 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 PLA2G4BP0C869 781 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 NR1D1P20393 614 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 TNNC1P63316 161 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 GRAPQ13588 217 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 ZCWPW2Q504Y3 356 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 IQCKQ8N0W5 287 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 GRAPLQ8TC17 118 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 MTMR4Q9NYA4 1195 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 GRID2IPA4D2P6 1211 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 GOLGA6L10A6NI86 522 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 STAT3P40763 770 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 SEC24CP53992 1094 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 KCNH2Q12809 1159 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 DCAF17Q5H9S7 520 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 MEI1Q5TIA1 1274 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 DDX42Q86XP3 938 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 HOMEZQ8IX15 550 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 PLAAQ9Y263 795 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 IRS2Q9Y4H2 1338 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 GPR75-ASB3A0A0A6YYF3 556 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 NR2F2P24468 414 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 OTUD6BQ8N6M0 293 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 ARHGEF1Q92888 912 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 CUL5Q93034 780 aa16.65■□□□□ 0.26
SEMA3B-203ENST00000419007 USP17L15C9J2P7 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L13C9JLJ4 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L11C9JVI0 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L18D6R9N7 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L22D6RA61 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L17D6RBQ6 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L19D6RCP7 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L20D6RJB6 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 RBAK-RBAKDNI3L0D1 243 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 CETN3O15182 167 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 RPS6KA4O75676 772 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 PLCG2P16885 1265 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 SLC9A1P19634 815 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 LSP1P33241 339 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 GPSM2P81274 684 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 PTK2Q05397 1052 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L24Q0WX57 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 RNF187Q5TA31 235 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L6PQ6QN14 398 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 TRIM59Q8IWR1 403 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 OR2W6PQ8NHA6 318 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 KAT2BQ92831 832 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 PSTPIP2Q9H939 334 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 JMJD4Q9H9V9 463 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 TNFRSF8P28908 595 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 SKOR1P84550 965 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 ASPRV1Q53RT3 343 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 SCFD1Q8WVM8 642 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 INPP4AQ96PE3 977 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 CAPN7Q9Y6W3 813 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 MEIS1O00470 390 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 CDC37Q16543 378 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 USP38Q8NB14 1042 aa16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 PPANQ9NQ55 473 aaKnown RBP16.64■□□□□ 0.25
SEMA3B-203ENST00000419007 POTEFA5A3E0 1075 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 SMARCA1P28370 1054 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 RFC4P35249 363 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 RHBDL3P58872 404 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 POTEGQ6S5H5 508 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 POTEEQ6S8J3 1075 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 KRT27Q7Z3Y8 459 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 CEP63Q96MT8 703 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 NT5C3AQ9H0P0 336 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 PCDHGC5Q9Y5F6 944 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 NRAPQ86VF7 1730 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 PNMA6FA0A0J9YX94 578 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 GNA14O95837 355 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 ODF2Q5BJF6 829 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms