RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 RTP1P59025 263 aa12□□□□□ -0.49
RFC1-203ENST00000418436 ARHGAP4P98171 946 aa12□□□□□ -0.49
RFC1-203ENST00000418436 PURAQ00577 322 aaKnown RBP12□□□□□ -0.49
RFC1-203ENST00000418436 BRDTQ58F21 947 aaPredicted RBP12□□□□□ -0.49
RFC1-203ENST00000418436 DHX37Q8IY37 1157 aaKnown RBP12□□□□□ -0.49
RFC1-203ENST00000418436 SLC43A3Q8NBI5 491 aa12□□□□□ -0.49
RFC1-203ENST00000418436 AFG1LQ8WV93 481 aa12□□□□□ -0.49
RFC1-203ENST00000418436 WASF1Q92558 559 aa12□□□□□ -0.49
RFC1-203ENST00000418436 CDHR1Q96JP9 859 aa12□□□□□ -0.49
RFC1-203ENST00000418436 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
RFC1-203ENST00000418436 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
RFC1-203ENST00000418436 PHF20Q9BVI0 1012 aa12□□□□□ -0.49
RFC1-203ENST00000418436 BCAS3Q9H6U6 928 aa12□□□□□ -0.49
RFC1-203ENST00000418436 NR2E3Q9Y5X4 410 aa12□□□□□ -0.49
RFC1-203ENST00000418436 GRIN2DO15399 1336 aa12□□□□□ -0.49
RFC1-203ENST00000418436 A0A0U1RQG5 324 aaPredicted RBP11.99□□□□□ -0.49
RFC1-203ENST00000418436 H0YGN5 161 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 ARVCFO00192 962 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 MEIS1O00470 390 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 EDIL3O43854 480 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 JAK2O60674 1132 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 ATP9AO75110 1047 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 CD2BP2O95400 341 aaKnown RBP11.99□□□□□ -0.49
RFC1-203ENST00000418436 MMP3P08254 477 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 KCNA2P16389 499 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 NEDD9Q14511 834 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 TRIM60Q495X7 471 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 CEP55Q53EZ4 464 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 PRPF38BQ5VTL8 546 aaKnown RBP11.99□□□□□ -0.49
RFC1-203ENST00000418436 NIPA1Q7RTP0 329 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 ANKRD33Q7Z3H0 272 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 CCDC83Q8IWF9 413 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 C7orf61Q8IZ16 206 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 BLIDQ8IZY5 108 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 GIMAP8Q8ND71 665 aaPredicted RBP11.99□□□□□ -0.49
RFC1-203ENST00000418436 PPTC7Q8NI37 304 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 CYP2W1Q8TAV3 490 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 RASGRP4Q8TDF6 673 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 TOX2Q96NM4 488 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 MTG1Q9BT17 334 aaPredicted RBP11.99□□□□□ -0.49
RFC1-203ENST00000418436 ALG1Q9BT22 464 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 SEZ6LQ9BYH1 1024 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 GJB4Q9NTQ9 266 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 KCNJ14Q9UNX9 436 aa11.99□□□□□ -0.49
RFC1-203ENST00000418436 IGLV3-22A0A075B6J6 115 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 PPFIA4O75335 1185 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 MYL3P08590 195 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 XBP1P17861 261 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 CIITAP33076 1130 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 MCM2P49736 904 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 TLE2Q04725 743 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 MTMR1Q13613 665 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 ITGA7Q13683 1181 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 HSDL1Q3SXM5 330 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 METTL7BQ6UX53 244 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 SPATA33Q96N06 139 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 MLXIPQ9HAP2 919 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 CDHR5Q9HBB8 845 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 KCNH7Q9NS40 1196 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 ATP11BQ9Y2G3 1177 aa11.98□□□□□ -0.49
RFC1-203ENST00000418436 LTBP2Q14767 1821 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 MROH7Q68CQ1 1323 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 FAM86B1E9PN63 330 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 FAM86B2P0C5J1 330 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 ARP10275 920 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 MLLT3P42568 568 aaPredicted RBP11.97□□□□□ -0.49
RFC1-203ENST00000418436 USP11P51784 963 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 PSMC6P62333 389 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 DGKDQ16760 1214 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 CYFIP1Q7L576 1253 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 KAT2BQ92831 832 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
RFC1-203ENST00000418436 AGO4Q9HCK5 861 aaKnown RBP11.97□□□□□ -0.49
RFC1-203ENST00000418436 NFASCO94856 1347 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 HAS3O00219 553 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 SORBS3O60504 671 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 F2P00734 622 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 CD4P01730 458 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 ZNF76P36508 570 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 PRSS12P56730 875 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 HMGN5P82970 282 aaKnown RBP11.96□□□□□ -0.49
RFC1-203ENST00000418436 FAAP100Q0VG06 881 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 KRT25Q7Z3Z0 450 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 TMX3Q96JJ7 454 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 GPR20Q99678 358 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 PDLIM7Q9NR12 457 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 SEPT9Q9UHD8 586 aaPredicted RBP11.96□□□□□ -0.49
RFC1-203ENST00000418436 TELO2Q9Y4R8 837 aa11.96□□□□□ -0.49
RFC1-203ENST00000418436 CYP3A7-CYP3A51PA0A087WV96 503 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 DCDC2CA8MYV0 355 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 KIAA0355O15063 1070 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 PQBP1O60828 265 aaKnown RBP11.95□□□□□ -0.5
RFC1-203ENST00000418436 MMP1P03956 469 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 CLTBP09497 229 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 CYP3A7P24462 503 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 PTPN5P54829 565 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 SETQ01105 290 aaPredicted RBP11.95□□□□□ -0.5
RFC1-203ENST00000418436 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms