RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SCN7AQ01118 1682 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 CHD8Q9HCK8 2581 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 SHTN1A0MZ66 631 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 ESR1P03372 595 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 MRE11P49959 708 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
CSTF1-202ENST00000415828 CLEC16AQ2KHT3 1053 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 VPS37DQ86XT2 251 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 CREG2Q8IUH2 290 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 TMEM192Q8IY95 271 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 MAFAQ8NHW3 353 aaPredicted RBP7□□□□□ -1.29
CSTF1-202ENST00000415828 SLC38A3Q99624 504 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 TM9SF2Q99805 663 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 KRTAP4-2Q9BYR5 136 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 ASCC2Q9H1I8 757 aaPredicted RBP7□□□□□ -1.29
CSTF1-202ENST00000415828 ADARB2Q9NS39 739 aaKnown RBP7□□□□□ -1.29
CSTF1-202ENST00000415828 GPRC5DQ9NZD1 345 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 SNED1Q8TER0 1413 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 EPG5Q9HCE0 2579 aa7□□□□□ -1.29
CSTF1-202ENST00000415828 TRANK1O15050 2925 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 DNAJC25-GNG10A0A024R161 153 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 GLI1P08151 1106 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 ACRP10323 421 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 TPP2P29144 1249 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-202ENST00000415828 CCNFP41002 786 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 MESP2Q0VG99 397 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 PKN1Q16512 942 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 SLC4A8Q2Y0W8 1093 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 CCDC93Q567U6 631 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 TMEM67Q5HYA8 995 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 RALGPS1Q5JS13 557 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 NBPF12Q5TAG4 269 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-202ENST00000415828 MPZL3Q6UWV2 235 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 TMPRSS7Q7RTY8 843 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 TTC6Q86TZ1 520 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 RBBP8NLQ8NC74 664 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-202ENST00000415828 RAPGEF4Q8WZA2 1011 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 SEC16BQ96JE7 1060 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 FAM84AQ96KN4 292 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-202ENST00000415828 FAM86C1Q9NVL1 165 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 WDR87Q6ZQQ6 2873 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 CGNL1Q0VF96 1302 aa6.99□□□□□ -1.29
CSTF1-202ENST00000415828 KTN1Q86UP2 1357 aaKnown RBP6.98□□□□□ -1.29
CSTF1-202ENST00000415828 LAMB2P55268 1798 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 ADM5C9JUS6 153 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 KRT37O76014 449 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 GUCY2CP25092 1073 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 HOXC9P31274 260 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 ZYXQ15942 572 aaKnown RBP6.98□□□□□ -1.29
CSTF1-202ENST00000415828 PPP2R5EQ16537 467 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 PRR23BQ6ZRT6 265 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 C2orf69Q8N8R5 385 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 ANAPC16Q96DE5 110 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 DHRS1Q96LJ7 313 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 GPR62Q9BZJ7 368 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 DUSP13Q9UII6 198 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 FBXL21Q9UKT6 434 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 ZNF609O15014 1411 aa6.98□□□□□ -1.29
CSTF1-202ENST00000415828 ARID1BQ8NFD5 2236 aaPredicted RBP6.97□□□□□ -1.29
CSTF1-202ENST00000415828 SHISA3A0PJX4 238 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 SSBP05455 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
CSTF1-202ENST00000415828 SRGNP10124 158 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 ATF4P18848 351 aaPredicted RBP6.97□□□□□ -1.29
CSTF1-202ENST00000415828 PDE6BP35913 854 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 ATRXP46100 2492 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 GIPRP48546 466 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 NMIQ13287 307 aaPredicted RBP6.97□□□□□ -1.29
CSTF1-202ENST00000415828 MYO9BQ13459 2157 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 LRIT3Q3SXY7 679 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 SOGA3Q5TF21 947 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 TDRD10Q5VZ19 366 aaKnown RBP6.97□□□□□ -1.29
CSTF1-202ENST00000415828 PRR5LQ6MZQ0 368 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 UNC5AQ6ZN44 842 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 UBE2Q1Q7Z7E8 422 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 CCDC144CPQ8IYA2 1237 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 CD99L2Q8TCZ2 262 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 CCDC120Q96HB5 630 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 BRIP1Q9BX63 1249 aa6.97□□□□□ -1.29
CSTF1-202ENST00000415828 SUCOQ9UBS9 1254 aaKnown RBP6.97□□□□□ -1.29
CSTF1-202ENST00000415828 ANKRD11Q6UB99 2663 aaPredicted RBP6.97□□□□□ -1.29
CSTF1-202ENST00000415828 DBX1A6NMT0 343 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 TM4SF4P48230 202 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 HK2P52789 917 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 ERVFC1P60507 584 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 SNW1Q13573 536 aaKnown RBP6.96□□□□□ -1.3
CSTF1-202ENST00000415828 GAB4Q2WGN9 574 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 NBPF9Q3BBW0 867 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 MOB2Q70IA6 237 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 TMC3Q7Z5M5 1100 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 TSPYL5Q86VY4 417 aaPredicted RBP6.96□□□□□ -1.3
CSTF1-202ENST00000415828 TAB3Q8N5C8 712 aaPredicted RBP6.96□□□□□ -1.3
CSTF1-202ENST00000415828 JDP2Q8WYK2 163 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 SHDQ96IW2 340 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 GDF15Q99988 308 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.32e-7■■□□□ 14.2
CSTF1-202ENST00000415828 LRFN3Q9BTN0 628 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 ADAMTS10Q9H324 1103 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms