RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 PPARDQ03181 441 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 ZNF713Q8N859 430 aaPredicted RBP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 TMBIM4Q9HC24 238 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 CFAP73A6NFT4 308 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 STAT1P42224 750 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 SETDB1Q15047 1291 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 SEPT7Q16181 437 aaKnown RBP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 USP38Q8NB14 1042 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 PURBQ96QR8 312 aaKnown RBP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 TRIM6Q9C030 488 aaPredicted RBP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 BIN2Q9UBW5 565 aaPredicted RBP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
SCN4B-202ENST00000415030 DAAM1Q9Y4D1 1078 aa12.66□□□□□ -0.38
SCN4B-202ENST00000415030 SART1O43290 800 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 LUC7L3O95232 432 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 PLCG2P16885 1265 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 GRM4Q14833 912 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 EXOC3L4Q17RC7 722 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 TBCKQ8TEA7 893 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 TCP11Q8WWU5 503 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 TBC1D31Q96DN5 1066 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 ATP8A1Q9Y2Q0 1164 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 GSTTP1A0A1W2PQM5 241 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 RAD51CO43502 376 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 HNRNPH3P31942 346 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 SARNPP82979 210 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 ZKSCAN8Q15776 578 aaPredicted RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 CYB5D1Q6P9G0 228 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 GBP7Q8N8V2 638 aaPredicted RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 C1orf131Q8NDD1 294 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 CASKIN2Q8WXE0 1202 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 RUNDC3BQ96NL0 473 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 GLT8D2Q9H1C3 349 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 SUN1O94901 812 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 TNFAIP3P21580 790 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 GCKP35557 465 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 ALKBH5Q6P6C2 394 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 DPP8Q6V1X1 898 aaPredicted RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 U2AF1L4Q8WU68 220 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 DUSP9Q99956 384 aaKnown RBP12.65□□□□□ -0.38
SCN4B-202ENST00000415030 CD248Q9HCU0 757 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 NKIRAS1Q9NYS0 192 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 FBXL5Q9UKA1 691 aa12.65□□□□□ -0.38
SCN4B-202ENST00000415030 GLI1P08151 1106 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 RPSAP08865 295 aaKnown RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 GCFC2P16383 781 aaKnown RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 HSPA6P17066 643 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 PICALMQ13492 652 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 LRRC41Q15345 812 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 EHD2Q9NZN4 543 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 TBC1D7Q9P0N9 293 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 RIC1Q4ADV7 1423 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 SNAP23O00161 211 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 FERP16591 822 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 VGLL2Q8N8G2 317 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 TLR10Q9BXR5 811 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 AP1M1Q9BXS5 423 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 KCNK9Q9NPC2 374 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 BATF3Q9NR55 127 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 ANXA13P27216 316 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 ZNF76P36508 570 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 C6orf118Q5T5N4 469 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 INTS8Q75QN2 995 aaKnown RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 ZNF572Q7Z3I7 529 aaPredicted RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 LMNTD2Q8IXW0 634 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 NOP53Q9NZM5 478 aaKnown RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 CETN2P41208 172 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 CRKLP46109 303 aaKnown RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
SCN4B-202ENST00000415030 KLHDC7AQ5VTJ3 777 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 CENPPQ6IPU0 288 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
SCN4B-202ENST00000415030 MMEP08473 750 aa12.63□□□□□ -0.39
SCN4B-202ENST00000415030 HSD17B3P37058 310 aa12.63□□□□□ -0.39
SCN4B-202ENST00000415030 GPBP1Q86WP2 473 aa12.63□□□□□ -0.39
SCN4B-202ENST00000415030 WDR66Q8TBY9 1149 aa12.63□□□□□ -0.39
SCN4B-202ENST00000415030 MICAL1Q8TDZ2 1067 aa12.63□□□□□ -0.39
SCN4B-202ENST00000415030 ZMYND12Q9H0C1 365 aa12.63□□□□□ -0.39
SCN4B-202ENST00000415030 ZNF408Q9H9D4 720 aa12.63□□□□□ -0.39
SCN4B-202ENST00000415030 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms