RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CKAP2LQ8IYA6 745 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 GRAMD1CQ8IYS0 662 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 RASSF8Q8NHQ8 419 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 USP6NLQ92738 828 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 STAMQ92783 540 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 PNMA5Q96PV4 448 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 TEKT3Q9BXF9 490 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 PDGFCQ9NRA1 345 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 FLRT1Q9NZU1 646 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 DNAH12Q6ZR08 3092 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 A0A087WWV3 80 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 MAFGO15525 162 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 MED24O75448 989 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 HSPA6P17066 643 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 CYP2B6P20813 491 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 TXLNAP40222 546 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 CYP4A11Q02928 519 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 CCL14Q16627 93 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 SDF4Q9BRK5 362 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 TNMDQ9H2S6 317 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 RGL1Q9NZL6 768 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 ASB14A6NK59 587 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 SNAI1O95863 264 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-202ENST00000414700 CCNE2O96020 404 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 ICAM3P32942 547 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 NOLC1Q14978 699 aaKnown RBP eCLIP17.4■□□□□ 0.381e-8■■■□□ 15.5
SHMT2-202ENST00000414700 UVSSAQ2YD98 709 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 KCNK18Q7Z418 384 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 ZNF467Q7Z7K2 595 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-202ENST00000414700 CATSPER3Q86XQ3 398 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 CNNM3Q8NE01 707 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 MTRQ99707 1265 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 CFHR5Q9BXR6 569 aa17.4■□□□□ 0.38
SHMT2-202ENST00000414700 B4DLN1 442 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 SPATA31C1P0DKV0 1188 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 UBA1P22314 1058 aaKnown RBP17.39■□□□□ 0.37
SHMT2-202ENST00000414700 C1QTNF8P60827 252 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 CBX1P83916 185 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 SP4Q02446 784 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 SP3Q02447 781 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 PDXDC2PQ6P474 469 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 MAMDC4Q6UXC1 1216 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 MPHOSPH6Q99547 160 aaKnown RBP17.39■□□□□ 0.37
SHMT2-202ENST00000414700 EIF2AK1Q9BQI3 630 aaKnown RBP17.39■□□□□ 0.37
SHMT2-202ENST00000414700 TINF2Q9BSI4 451 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 KATNBL1Q9H079 304 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 TBC1D22BQ9NU19 505 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 GABRQQ9UN88 632 aa17.39■□□□□ 0.37
SHMT2-202ENST00000414700 DIS3Q9Y2L1 958 aaKnown RBP17.39■□□□□ 0.37
SHMT2-202ENST00000414700 POTEFA5A3E0 1075 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 HOXC6P09630 235 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 CASP1P29466 404 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 CCT6AP40227 531 aaKnown RBP17.38■□□□□ 0.37
SHMT2-202ENST00000414700 STAT6P42226 847 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 RRAGBQ5VZM2 374 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 POTEGQ6S5H5 508 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 CYFIP1Q7L576 1253 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 CDHR1Q96JP9 859 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 TIGD1Q96MW7 591 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 SPTLC3Q9NUV7 552 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
SHMT2-202ENST00000414700 LOC102724159A0A0B4J2E5 919 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 PRR29P0C7W0 189 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 AFMP43652 599 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 FCGRTP55899 365 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 PNOCQ13519 176 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 PWP2Q15269 919 aaKnown RBP17.38■□□□□ 0.37
SHMT2-202ENST00000414700 TAPT1Q6NXT6 567 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 HSD17B14Q9BPX1 270 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 WRAP73Q9P2S5 460 aaPredicted RBP17.38■□□□□ 0.37
SHMT2-202ENST00000414700 TSKSQ9UJT2 592 aa17.38■□□□□ 0.37
SHMT2-202ENST00000414700 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-202ENST00000414700 CTTNQ14247 550 aaKnown RBP17.37■□□□□ 0.37
SHMT2-202ENST00000414700 SOCS4Q8WXH5 440 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 CALML4Q96GE6 196 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 DYDC2Q96IM9 177 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 BLOC1S4Q9NUP1 217 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 KIAA1024Q9UPX6 916 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 SAMM50Q9Y512 469 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 SLITRK3O94933 977 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 RPA1P27694 616 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 CYP2C19P33261 490 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 PSMC6P62333 389 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 TMEM119Q4V9L6 283 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 HYIQ5T013 277 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 GJC2Q5T442 439 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-202ENST00000414700 HAUS3Q68CZ6 603 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 RBM43Q6ZSC3 357 aaKnown RBP17.37■□□□□ 0.37
SHMT2-202ENST00000414700 MIER3Q7Z3K6 550 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 BANK1Q8NDB2 785 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 COPS5Q92905 334 aa17.37■□□□□ 0.37
SHMT2-202ENST00000414700 JPH1Q9HDC5 661 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms