RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 CUEDC2Q9H467 287 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 ZNF219Q9P2Y4 722 aaPredicted RBP9.79□□□□□ -0.84
SIK3-202ENST00000413553 GRID2IPA4D2P6 1211 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 H0YIN7 160 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 KCNK3O14649 394 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 OPLAHO14841 1288 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 SEMA3FQ13275 785 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 LETM2Q2VYF4 491 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 DYMQ7RTS9 669 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 CCDC50Q8IVM0 306 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 DHX37Q8IY37 1157 aaKnown RBP9.79□□□□□ -0.84
SIK3-202ENST00000413553 MIEF2Q96C03 454 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 MAGEF1Q9HAY2 307 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 PLCB1Q9NQ66 1216 aa9.79□□□□□ -0.84
SIK3-202ENST00000413553 TPX2Q9ULW0 747 aaKnown RBP9.79□□□□□ -0.84
SIK3-202ENST00000413553 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 CCDC88AQ3V6T2 1871 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 FLT1P17948 1338 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 TRAPPC3O43617 180 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 CCNT1O60563 726 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 RPSAP08865 295 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 NPR1P16066 1061 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 ATP2B4P23634 1241 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 TECP42680 631 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 ERVK-9P63128 1117 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 SF3A3Q12874 501 aaKnown RBP eCLIP9.78□□□□□ -0.84
SIK3-202ENST00000413553 KIAA0753Q2KHM9 967 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 WLSQ5T9L3 541 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 SFMBT2Q5VUG0 894 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 RUFY4Q6ZNE9 571 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 USP38Q8NB14 1042 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 LRRC45Q96CN5 670 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 INPP4AQ96PE3 977 aaPredicted RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 RIOK1Q9BRS2 568 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 PCDHA6Q9UN73 950 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 NOVA2Q9UNW9 492 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 PCDHA8Q9Y5H6 950 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 SSU72P8A0A1W2PR75 194 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 CLSTN1O94985 981 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 FGFR1OPO95684 399 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 OR52Z1P0C646 297 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 GCFC2P16383 781 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 HOXA10P31260 410 aaPredicted RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 SCTRP47872 440 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 PPP2R2AP63151 447 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 ZNF844Q08AG5 666 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 RAPGEF1Q13905 1077 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 GKAP1Q5VSY0 366 aaPredicted RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 DZIP1Q86YF9 867 aaKnown RBP9.78□□□□□ -0.84
SIK3-202ENST00000413553 STAG2Q8N3U4 1231 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 TBC1D5Q92609 795 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 CALML4Q96GE6 196 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 C7orf25Q9BPX7 421 aa9.78□□□□□ -0.84
SIK3-202ENST00000413553 A0A1B0GUL6 1792 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 SRRM3A6NNA2 597 aaPredicted RBP9.77□□□□□ -0.84
SIK3-202ENST00000413553 TMCO5BA8MYB1 307 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 NEBLO76041 1014 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 POLR2FP61218 127 aaKnown RBP9.77□□□□□ -0.84
SIK3-202ENST00000413553 PPP2R5AQ15172 486 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 ASTE1Q2TB18 679 aaPredicted RBP9.77□□□□□ -0.84
SIK3-202ENST00000413553 MEI1Q5TIA1 1274 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 HGSNATQ68CP4 663 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 CENPPQ6IPU0 288 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 LRIG3Q6UXM1 1119 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 FAM228AQ86W67 206 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 KIRREL3Q8IZU9 778 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 C1orf131Q8NDD1 294 aaKnown RBP9.77□□□□□ -0.84
SIK3-202ENST00000413553 TBC1D31Q96DN5 1066 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 MASTLQ96GX5 879 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 ISCUQ9H1K1 167 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 SLC12A6Q9UHW9 1150 aa9.77□□□□□ -0.84
SIK3-202ENST00000413553 CEP104O60308 925 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 NAA25Q14CX7 972 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 NAB2Q15742 525 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 UAP1Q16222 522 aaPredicted RBP9.77□□□□□ -0.85
SIK3-202ENST00000413553 KRT71Q3SY84 523 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 RAPGEF5Q92565 580 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 HVCN1Q96D96 273 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 AP1M1Q9BXS5 423 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 PACSIN1Q9BY11 444 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
SIK3-202ENST00000413553 GOLPH3Q9H4A6 298 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 BAIAP2L1Q9UHR4 511 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 FBXL5Q9UKA1 691 aa9.77□□□□□ -0.85
SIK3-202ENST00000413553 A0A1B0GUA9 196 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 PHF20L1A8MW92 1017 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 LAD1O00515 517 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 PPP1R12BO60237 982 aaPredicted RBP9.76□□□□□ -0.85
SIK3-202ENST00000413553 SERPING1P05155 500 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 PRDX5P30044 214 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 SLC8A1P32418 973 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 MAGOHP61326 146 aaKnown RBP9.76□□□□□ -0.85
SIK3-202ENST00000413553 BIRC3Q13489 604 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 LRRC41Q15345 812 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 RPS6KA1Q15418 735 aa9.76□□□□□ -0.85
SIK3-202ENST00000413553 DPP8Q6V1X1 898 aaPredicted RBP9.76□□□□□ -0.85
SIK3-202ENST00000413553 SV2BQ7L1I2 683 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms