RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 RAD23BP54727 409 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 STK17AQ9UEE5 414 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 MMP14P50281 582 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 MIPOL1Q8TD10 442 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 ERGIC2Q96RQ1 377 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 PRMT1Q99873 361 aaKnown RBP15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 JCADQ9P266 1359 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 AGPSO00116 658 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 FAM153BP0C7A2 387 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 PBX1P40424 430 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 CDK17Q00537 523 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 FAM153CQ494X1 144 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 KCNV1Q6PIU1 500 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 MDM1Q8TC05 714 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 FAM153AQ9UHL3 310 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 GSTA1P08263 222 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 STRN3Q13033 797 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 GIMAP8Q8ND71 665 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 PTPN22Q9Y2R2 807 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 LDHCP07864 332 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 ADCY1Q08828 1119 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 PDCD2Q16342 344 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 TEX9Q8N6V9 391 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 SETD1BQ9UPS6 1966 aaKnown RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 ZSCAN5CA6NGD5 496 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 SRRM3A6NNA2 597 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 ATP5HO75947 161 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 FAM13AO94988 1023 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 BCAMP50895 628 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 ZNF449Q6P9G9 518 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 LRRC8CQ8TDW0 803 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 NT5C3AQ9H0P0 336 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 BIN2Q9UBW5 565 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 USP15Q9Y4E8 981 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-201ENST00000412649 ZNF233A6NK53 670 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 HSPA6P17066 643 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 PPP1R21Q6ZMI0 780 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 SPZ1Q9BXG8 430 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 C15orf41Q9Y2V0 281 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 FCER1AP12319 257 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 GJC1P36383 396 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 DYNC1I2Q13409 638 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 FRMD4BQ9Y2L6 1034 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 ORC4O43929 436 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 SNUPNO95149 360 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 FERP16591 822 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 HSPA9P38646 679 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 LRRC14Q15048 493 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 PITPNM3Q9BZ71 974 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 LEMD3Q9Y2U8 911 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 PCDH11XQ9BZA7 1347 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 PCDH11YQ9BZA8 1340 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 LMNB1P20700 586 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 RANBP1P43487 201 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 UNC13DQ70J99 1090 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 GPBP1Q86WP2 473 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 KIF2BQ8N4N8 673 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 CALR3Q96L12 384 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 STOML1Q9UBI4 398 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 PCDHB13Q9Y5F0 798 aa15.09■□□□□ 0.01
CLTCL1-201ENST00000412649 TTI1O43156 1089 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 TRAPPC3O43617 180 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 PSMD2Q13200 908 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 ITIH4Q14624 930 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 PDIA6Q15084 440 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 SLC18A3Q16572 532 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 FIGNQ5HY92 759 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 ANKRD35Q8N283 1001 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 PPP1R14CQ8TAE6 165 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 HOMER2Q9NSB8 354 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 TYW1Q9NV66 732 aaKnown RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 ARL2BPQ9Y2Y0 163 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 REXO2Q9Y3B8 237 aaKnown RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 PFDN1O60925 122 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 LMNAP02545 664 aaKnown RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 TRAF1Q13077 416 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 MEA1Q16626 185 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 ARHGAP44Q17R89 818 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 PROCA1Q8NCQ7 364 aaPredicted RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 NUDCD1Q96RS6 583 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 GSG1L2A8MUP6 293 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 MAPK13O15264 365 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 CREB3O43889 395 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 OPHN1O60890 802 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 DNAJC8O75937 253 aaPredicted RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 AGTP01019 485 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 EEF2P13639 858 aaKnown RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 NQO1P15559 274 aaKnown RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 NR2F2P24468 414 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 ADCY7P51828 1080 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 NAB2Q15742 525 aa15.08■□□□□ 0
CLTCL1-201ENST00000412649 PFKFB3Q16875 520 aaPredicted RBP15.08■□□□□ 0
CLTCL1-201ENST00000412649 SPDYE1Q8NFV5 336 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms