RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CD3EP07766 207 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PAMP19021 973 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 RGS19P49795 217 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SELENOPP49908 381 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZNF445P59923 1031 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 IGBP1P78318 339 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DPTQ07507 201 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 LRCH2Q5VUJ6 765 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 RCSD1Q6JBY9 416 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 KIAA0907Q7Z7F0 614 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CIR1Q86X95 450 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SMARCC2Q8TAQ2 1214 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MICAL1Q8TDZ2 1067 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DCAF4Q8WV16 495 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PTPRN2Q92932 1015 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NINJ1Q92982 152 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZG16BQ96DA0 208 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ALG1Q9BT22 464 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 BCAS3Q9H6U6 928 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MAGEC2Q9UBF1 373 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MRPS23Q9Y3D9 190 aaKnown RBP3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SOGA1O94964 1423 aa3.61□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PPM1GO15355 546 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NPTXRO95502 500 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SCG5P05408 212 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PABPC1P11940 636 aaKnown RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PMLP29590 882 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CNGA1P29973 690 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CEBPAP49715 358 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SNW1Q13573 536 aaKnown RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SART3Q15020 963 aaKnown RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 R3HDM1Q15032 1099 aaKnown RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 HLA-DQA1Q5Y7H0 255 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GTF2IRD2BQ6EKJ0 949 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 UBE2R2Q712K3 238 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FILIP1Q7Z7B0 1213 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MTDHQ86UE4 582 aaKnown RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GTF2IRD2Q86UP8 949 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CABP7Q86V35 215 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NIM1KQ8IY84 436 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 LILRB2Q8N423 598 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CHAC2Q8WUX2 184 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 BTN2A2Q8WVV5 523 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 BRF1Q92994 677 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 VOPP1Q96AW1 172 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MRGPRX3Q96LB0 322 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 IER2Q9BTL4 223 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 TRIM8Q9BZR9 551 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NCOA5Q9HCD5 579 aaKnown RBP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MCM8Q9UJA3 840 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MINPP1Q9UNW1 487 aa3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 AQRO60306 1485 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU6-1140P-201ENST00000410517 EIF4G3O43432 1585 aaKnown RBP3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 A0A087X1B8 175 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 C2orf71A6NGG8 1288 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 H0Y8X5 98 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GPR42O15529 346 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DIAPH1O60610 1272 aaKnown RBP3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MAFKO60675 156 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ZNF202O95125 648 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ASLP04424 464 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FAM153BP0C7A2 387 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 IGFALSP35858 605 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 GFRA1P56159 465 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SCRN1Q12765 414 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FOXE3Q13461 319 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 SURF1Q15526 300 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PTPROQ16827 1216 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 KIZQ2M2Z5 673 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 FAM47CQ5HY64 1035 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 IGFL4Q6B9Z1 124 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MCTP2Q6DN12 878 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 EP400NLQ6ZTU2 488 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DDX53Q86TM3 631 aaKnown RBP3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 JAMLQ86YT9 394 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PPIL6Q8IXY8 311 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 IFNL3Q8IZI9 196 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 TMEM52Q8NDY8 209 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 DNERQ8NFT8 737 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 IGDCC4Q8TDY8 1250 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 MAGEB10Q96LZ2 347 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 ARHGEF4Q9NR80 690 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 AP5S1Q9NUS5 200 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 APEX2Q9UBZ4 518 aa3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 NOP58Q9Y2X3 529 aaKnown RBP3.59□□□□□ -1.83
RNU6-1140P-201ENST00000410517 CLASP1Q7Z460 1538 aa3.59□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NPHP3-ACAD11A0A0J9YXS1 232 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 STXBP3O00186 592 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MEIS1O00470 390 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 AURKAO14965 403 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SHOXO15266 292 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 OPA1O60313 960 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NPHS1O60500 1241 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ZNF205O95201 554 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GSTM1P09488 218 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 VAV1P15498 845 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 LTBRP36941 435 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ECI1P42126 302 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms