RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 RSBN1LQ6PCB5 846 aaPredicted RBP9.09□□□□□ -0.95
SCN9A-203ENST00000409672 EXOC8Q8IYI6 725 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ARFGAP2Q8N6H7 521 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 P3H4Q92791 437 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 BTBD18B2RXH4 712 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 E5RI56 91 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 PSAPP07602 524 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 MFAP3P55082 362 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 RBBP7Q16576 425 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 PCGF5Q86SE9 256 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 NCLNQ969V3 563 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ATXN7L3BQ96GX2 97 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 CPVLQ9H3G5 476 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 DAAM1Q9Y4D1 1078 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ERVV-2B6SEH9 535 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 KBTBD13C9JR72 458 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 MYO1FO00160 1098 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 NR2F2P24468 414 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 FARP1Q9Y4F1 1045 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 MAP3K15Q6ZN16 1313 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 MOCS3O95396 460 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 LCP1P13796 627 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 ADORA2BP29275 332 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 ZKSCAN8Q15776 578 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 PAN2Q504Q3 1202 aaKnown RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 FBXL13Q8NEE6 735 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 ENC1O14682 589 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 ECE2O60344 883 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 OCRLQ01968 901 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 LBRQ14739 615 aaKnown RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 FANCBQ8NB91 859 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 TNPO2O14787 897 aaKnown RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 SNRNP48Q6IEG0 339 aaKnown RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 EFCAB13Q8IY85 973 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 NUDCD1Q96RS6 583 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 EDEM3Q9BZQ6 932 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 ZNF233A6NK53 670 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 HLA-DPA1P20036 260 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 PTH1RQ03431 593 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 KCTD16Q68DU8 428 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 SH3RF3Q8TEJ3 882 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 SBNO1A3KN83 1393 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 ME3Q16798 604 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 GRK7Q8WTQ7 553 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 HAUS8Q9BT25 410 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 TLK1Q9UKI8 766 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 PRRG1O14668 218 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 SLCO1A2P46721 670 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 TSPY1Q01534 308 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 DNAJC24Q6P3W2 148 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 OR6J1Q8NGC5 347 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 PIP4K2CQ8TBX8 421 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 SPATA33Q96N06 139 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 PI4KBQ9UBF8 816 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 CYP2B6P20813 491 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 AP1B1Q10567 949 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 MAGOHBQ96A72 148 aaKnown RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 TPX2Q9ULW0 747 aaKnown RBP9.08□□□□□ -0.96
SCN9A-203ENST00000409672 RALGAPBQ86X10 1494 aa9.08□□□□□ -0.96
SCN9A-203ENST00000409672 TAS2R42Q7RTR8 314 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ACCSQ96QU6 501 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SYTL2Q9HCH5 934 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ZSCAN32Q9NX65 697 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 GCNT4Q9P109 453 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 WDR62O43379 1518 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ARAP3Q8WWN8 1544 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 STX1BP61266 288 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ZNF568Q3ZCX4 644 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 RFWD2Q8NHY2 731 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 MAIP1Q8WWC4 291 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ARHGAP45Q92619 1136 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 CABS1Q96KC9 395 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SNAP23O00161 211 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 RASSF2P50749 326 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ATN1P54259 1190 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SPP2Q13103 211 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 MAP7D3Q8IWC1 876 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 LMNTD2Q8IXW0 634 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 CNOT6LQ96LI5 555 aaKnown RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 NFKBIL1Q9UBC1 381 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SERPINB13Q9UIV8 391 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 KDM2BQ8NHM5 1336 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SPTLC1O15269 473 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SNX2O60749 519 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 TADA2AO75478 443 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 BRD1O95696 1058 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 TCEA2Q15560 299 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 NDUFAF2Q8N183 169 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SOS2Q07890 1332 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 KIF28PB7ZC32 967 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 PPP2R5BQ15173 497 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ARHGAP24Q8N264 748 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 FAM133AQ8N9E0 248 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 KCNG1Q9UIX4 513 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ZNF518AQ6AHZ1 1483 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 SOX11P35716 441 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms