RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 BMP15O95972 392 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 MYBP10242 640 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 EEF1GP26641 437 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 ZNF280AP59817 542 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 PPP2R2AP63151 447 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 DYNC1I2Q13409 638 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 TRIM29Q14134 588 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 HIBCHQ6NVY1 386 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 PIGWQ7Z7B1 504 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 ANKRD23Q86SG2 305 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 RNF10Q8N5U6 811 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 GBP7Q8N8V2 638 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 CCDC197Q8NCU1 140 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 ZNF507Q8TCN5 953 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 HDAC7Q8WUI4 952 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 EZH1Q92800 747 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 LRRC45Q96CN5 670 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 JADE2Q9NQC1 790 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 BAIAP2L1Q9UHR4 511 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 LRRC42Q9Y546 428 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 LGALS16A8MUM7 142 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 H0YGN5 161 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 GCOM1H8Y6P7 765 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 PRC1O43663 620 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 CAND2O75155 1236 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 MYZAPP0CAP1 466 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 GTF2IP78347 998 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 MTMR3Q13615 1198 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 HSP90AA4PQ58FG1 418 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 SESTD1Q86VW0 696 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 CERS5Q8N5B7 392 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 VGLL2Q8N8G2 317 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 MKL1Q969V6 931 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 THOC1Q96FV9 657 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 TSC22D3Q99576 134 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 CD209Q9NNX6 404 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 GGA3Q9NZ52 723 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 NFS1Q9Y697 457 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 ARAP2Q8WZ64 1704 aa11.66□□□□□ -0.54
NIF3L1-204ENST00000409357 TTC26A0AVF1 554 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 FRMD3A2A2Y4 597 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 ZNF185O15231 689 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 SKAP2O75563 359 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 ATP4AP20648 1035 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 GYG1P46976 350 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 VEGFBP49765 207 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 DNM2P50570 870 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 ZBED6P86452 979 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 CUL1Q13616 776 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 PPP1R7Q15435 360 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 SPRED3Q2MJR0 410 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 CFAP221Q4G0U5 840 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 KCTD16Q68DU8 428 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 C15orf52Q6ZUT6 534 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 SPATA21Q7Z572 469 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 ATL2Q8NHH9 583 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 FAM81AQ8TBF8 368 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 TTYH3Q9C0H2 523 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 ZNF408Q9H9D4 720 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 ABT1Q9ULW3 272 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.54
NIF3L1-204ENST00000409357 SPDYE3A6NKU9 549 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 CELF2O95319 508 aaKnown RBP11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 ZFYP08048 801 aaPredicted RBP11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 KIF5BP33176 963 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 LAMB3Q13751 1172 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 SCARF1Q14162 830 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 PDS5AQ29RF7 1337 aaKnown RBP11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 ERMARDQ5T6L9 678 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 THEMIS2Q5TEJ8 643 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 CCDC181Q5TID7 509 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 KRT26Q7Z3Y9 468 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 ARHGAP22Q7Z5H3 698 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 NCAPG2Q86XI2 1143 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 RAPGEF5Q92565 580 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 CHMP6Q96FZ7 201 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 SH2D4AQ9H788 454 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 PPANQ9NQ55 473 aaKnown RBP11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 RMND1Q9NWS8 449 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 PCDHAC2Q9Y5I4 1007 aa11.65□□□□□ -0.55
NIF3L1-204ENST00000409357 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 ENO4A6NNW6 628 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 KCNJ18B7U540 433 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 F8W031 263 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms