RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SLC38A10Q9HBR0 1119 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 RNMTO43148 476 aaKnown RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 DARS2Q6PI48 645 aaKnown RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 EPM2AIP1Q7L775 607 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 JAK2O60674 1132 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 TRPC1P48995 793 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 CLCN6P51797 869 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 PPARDQ03181 441 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 GCOM2Q9BZD3 368 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 KRT16P08779 473 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 ZBED6P86452 979 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 NDUFAF2Q8N183 169 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 SCG3Q8WXD2 468 aaKnown RBP13.05□□□□□ -0.32
SHANK2-203ENST00000409161 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 OLA1Q9NTK5 396 aaKnown RBP13.05□□□□□ -0.32
SHANK2-203ENST00000409161 INTUQ9ULD6 942 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 GOLGA8TH3BQL2 631 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 HNRNPDLO14979 420 aaKnown RBP13.05□□□□□ -0.32
SHANK2-203ENST00000409161 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 PTGDRQ13258 359 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 KLHL38Q2WGJ6 581 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 SUFUQ9UMX1 484 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 PLB1Q6P1J6 1458 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 WDR64B1ANS9 1081 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 GDAP1Q8TB36 358 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 NCLNQ969V3 563 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 UBN1Q9NPG3 1134 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 TBC1D23Q9NUY8 699 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 DYDC2Q96IM9 177 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 UBE4BO95155 1302 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 GPATCH8Q9UKJ3 1502 aaKnown RBP13.05□□□□□ -0.32
SHANK2-203ENST00000409161 TRPV6Q9H1D0 765 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 BLOC1S6Q9UL45 172 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 SLC8A2Q9UPR5 921 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 HSPA4LO95757 839 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
SHANK2-203ENST00000409161 MCUQ8NE86 351 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 A2MP01023 1474 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 XKR9Q5GH70 373 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 FRA10AC1Q70Z53 315 aa13.05□□□□□ -0.32
SHANK2-203ENST00000409161 CACNA1FO60840 1977 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 MIF4GDA9UHW6 222 aaKnown RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 PRPSAP2O60256 369 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 KRT1P04264 644 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 YWHAHQ04917 246 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 TERF2Q15554 542 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 SPOUT1Q5T280 376 aaKnown RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 GPT2Q8TD30 523 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 DAB1O75553 588 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 CIITAP33076 1130 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 PABPC4Q13310 644 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 NHEJ1Q9H9Q4 299 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 PAPOLAP51003 745 aaKnown RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 P2RX5Q93086 422 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 CYP26B1Q9NR63 512 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 MYO1CO00159 1063 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 BASP1P80723 227 aaKnown RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 CNGA3Q16281 694 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 FANCBQ8NB91 859 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 S100A5P33763 92 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 ARL4CP56559 192 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 ASPRV1Q53RT3 343 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 RDH13Q8NBN7 331 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 FAM193BQ96PV7 902 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 PARD6BQ9BYG5 372 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 MAGEB5Q9BZ81 275 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 SENP1Q9P0U3 644 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 GRID2IPA4D2P6 1211 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 C2orf54Q08AI8 447 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 SLC39A14Q15043 492 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 TTC13Q8NBP0 860 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 MEIS1O00470 390 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 CCDC22O60826 627 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 AARSP49588 968 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHANK2-203ENST00000409161 EPAS1Q99814 870 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
SHANK2-203ENST00000409161 FAM95CA0A1B0GW59 222 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 STXBP3O00186 592 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 NDUFA10O95299 355 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 ODR4Q5SWX8 454 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 COPEO14579 308 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 TMPRSS15P98073 1019 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 CEP55Q53EZ4 464 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 PYGMP11217 842 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms