RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 CLIC4Q9Y696 253 aa16.55■□□□□ 0.24
PPM1F-203ENST00000407142 ZNF233A6NK53 670 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 PRPF3O43395 683 aaKnown RBP16.54■□□□□ 0.24
PPM1F-203ENST00000407142 CYP21A2P08686 494 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 PSMC2P35998 433 aaKnown RBP16.54■□□□□ 0.24
PPM1F-203ENST00000407142 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 GIMAP8Q8ND71 665 aaPredicted RBP16.54■□□□□ 0.24
PPM1F-203ENST00000407142 KLHL29Q96CT2 875 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 MRPL46Q9H2W6 279 aaKnown RBP16.54■□□□□ 0.24
PPM1F-203ENST00000407142 EPB41L5Q9HCM4 733 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 GOLGA8CPA6NN73 597 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 SPDYE16A6NNV3 312 aaPredicted RBP16.54■□□□□ 0.24
PPM1F-203ENST00000407142 SURF1Q15526 300 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 A6NJR5 290 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 GH2P01242 217 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 MYL3P08590 195 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 TAF11Q15544 211 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 MAP7D3Q8IWC1 876 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 FEM1BQ9UK73 627 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 PCDHB4Q9Y5E5 795 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 PPP6R2O75170 966 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 MYL1P05976 194 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 MTERF2Q49AM1 385 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 MUM1L1Q5H9M0 696 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 PDXDC2PQ6P474 469 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 TMTC3Q6ZXV5 915 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 JRKLQ9Y4A0 524 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 GOLGA8QA0A0J9YX86 632 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 GOLGA8OA6NCC3 632 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 GOLGA8NF8WBI6 632 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 YWHAGP61981 247 aaKnown RBP eCLIP16.54■□□□□ 0.24
PPM1F-203ENST00000407142 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
PPM1F-203ENST00000407142 CDKL2Q92772 493 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 SLC12A6Q9UHW9 1150 aa16.54■□□□□ 0.24
PPM1F-203ENST00000407142 INHBAP08476 426 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 RINT1Q6NUQ1 792 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 PDCD7Q8N8D1 485 aaKnown RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 TRIM11Q96F44 468 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 CD209Q9NNX6 404 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 MINPP1Q9UNW1 487 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 BZW2Q9Y6E2 419 aaKnown RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 XPAP23025 273 aaPredicted RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 ZKSCAN8Q15776 578 aaPredicted RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 EXOC3L4Q17RC7 722 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 CNOT6LQ96LI5 555 aaKnown RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 PTPN22Q9Y2R2 807 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 MYO1EQ12965 1108 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 DGKHQ86XP1 1220 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 TRIM42Q8IWZ5 723 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 OSBP2Q969R2 916 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 CNOT10Q9H9A5 744 aaKnown RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 TXLNGQ9NUQ3 528 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 ZMYND10O75800 440 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 EEF1GP26641 437 aaKnown RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 LMNB2Q03252 620 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 PDCD2Q16342 344 aaPredicted RBP16.53■□□□□ 0.24
PPM1F-203ENST00000407142 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 GCNAQ96QF7 691 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
PPM1F-203ENST00000407142 GPC4O75487 556 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 SASH1O94885 1247 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 ESRRGP62508 458 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 RBL2Q08999 1139 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 AP3B2Q13367 1082 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 ALCAMQ13740 583 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 FAM133BQ5BKY9 247 aaKnown RBP16.52■□□□□ 0.24
PPM1F-203ENST00000407142 NME8Q8N427 588 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.24
PPM1F-203ENST00000407142 DRC3Q9H069 523 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.52■□□□□ 0.24
PPM1F-203ENST00000407142 CCDC151A5D8V7 595 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 APOEP02649 317 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 EIF2AK2P19525 551 aaKnown RBP16.52■□□□□ 0.24
PPM1F-203ENST00000407142 VPS72Q15906 364 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 KAZNQ674X7 775 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
PPM1F-203ENST00000407142 SH3RF3Q8TEJ3 882 aaPredicted RBP16.52■□□□□ 0.24
PPM1F-203ENST00000407142 FAM167AQ96KS9 214 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 DAAM1Q9Y4D1 1078 aa16.52■□□□□ 0.24
PPM1F-203ENST00000407142 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.24
PPM1F-203ENST00000407142 IKBKBO14920 756 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.23
PPM1F-203ENST00000407142 JAK3P52333 1124 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 GOLGA8FQ08AF8 430 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 C2orf54Q08AI8 447 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 GOLGA8DPQ0D2H9 430 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 ARHGEF18Q6ZSZ5 1173 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 TAB3Q8N5C8 712 aaPredicted RBP16.52■□□□□ 0.23
PPM1F-203ENST00000407142 PGBD1Q96JS3 809 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 MAD1L1Q9Y6D9 718 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 LMNB1P20700 586 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 NNTQ13423 1086 aa16.52■□□□□ 0.23
PPM1F-203ENST00000407142 ABTB1Q969K4 478 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms