RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 ARAP2Q8WZ64 1704 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 NDUFB10O96000 172 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 MIGA2Q7L4E1 593 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 TEX2Q8IWB9 1127 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
PCNX4-204ENST00000406949 ACTN1P12814 892 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 USP14P54578 494 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
PCNX4-204ENST00000406949 PPP1R18Q6NYC8 613 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 TRAPPC11Q7Z392 1133 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 PODNQ7Z5L7 613 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 HAS1Q92839 578 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 RABGAP1Q9Y3P9 1069 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 MED24O75448 989 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 HOXA10P31260 410 aaPredicted RBP13.09□□□□□ -0.31
PCNX4-204ENST00000406949 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 ZSCAN26Q16670 478 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 PPP4R3AQ6IN85 833 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 TMEM179Q6ZVK1 233 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
PCNX4-204ENST00000406949 RIN2Q8WYP3 895 aaPredicted RBP13.09□□□□□ -0.31
PCNX4-204ENST00000406949 FGFBP2Q9BYJ0 223 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
PCNX4-204ENST00000406949 GAS7O60861 476 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 RPL13P26373 211 aaKnown RBP13.08□□□□□ -0.32
PCNX4-204ENST00000406949 HS2ST1Q7LGA3 356 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 DNAAF5Q86Y56 855 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 IQCDQ96DY2 449 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 FAM204AQ9H8W3 233 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 RSPH14Q9UHP6 348 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 CALUO43852 315 aaPredicted RBP13.08□□□□□ -0.32
PCNX4-204ENST00000406949 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
PCNX4-204ENST00000406949 PSMC6P62333 389 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 PDXDC1Q6P996 788 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 CYP2W1Q8TAV3 490 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 MS4A14Q96JA4 679 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 RPGRIP1Q96KN7 1286 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 SPATA31A6Q5VVP1 1343 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 IRS2Q9Y4H2 1338 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 GNA14O95837 355 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 TCP1P17987 556 aaKnown RBP13.08□□□□□ -0.32
PCNX4-204ENST00000406949 LRCH2Q5VUJ6 765 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 HHIPL2Q6UWX4 724 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 DCAF4Q8WV16 495 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 SUGT1Q9Y2Z0 365 aa13.08□□□□□ -0.32
PCNX4-204ENST00000406949 RSPH10B2B2RC85 870 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 C21orf2O43822 256 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 RNF40O75150 1001 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 RSPH10BP0C881 870 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 GUCY2FP51841 1108 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 GABPAQ06546 454 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 OSBPL9Q96SU4 736 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 KCNK3O14649 394 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 CEP104O60308 925 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 PALMO75781 387 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 CYP11B2P19099 503 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 SEMA3FQ13275 785 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 MEA1Q16626 185 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 ARHGAP44Q17R89 818 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 CFAP221Q4G0U5 840 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 CATSPER3Q86XQ3 398 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 PROM2Q8N271 834 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 AFAP1L1Q8TED9 768 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 SH2D4AQ9H788 454 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 SNX12Q9UMY4 172 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 BCS1LQ9Y276 419 aa13.07□□□□□ -0.32
PCNX4-204ENST00000406949 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 ABCB4P21439 1286 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 STAT2P52630 851 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 DLGAP5Q15398 846 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 EZH2Q15910 746 aaKnown RBP13.06□□□□□ -0.32
PCNX4-204ENST00000406949 KCTD19Q17RG1 926 aaPredicted RBP13.06□□□□□ -0.32
PCNX4-204ENST00000406949 MAATS1Q7Z4T9 603 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 LRRC1Q9BTT6 524 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 GOLPH3Q9H4A6 298 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 L1RE1Q9UN81 338 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 HSF2BPO75031 334 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 SERPING1P05155 500 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 MYBP10242 640 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
PCNX4-204ENST00000406949 CEP72Q9P209 647 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 A0A1B0GUL6 1792 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 ANO9A1A5B4 782 aa13.06□□□□□ -0.32
PCNX4-204ENST00000406949 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms