RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 USP54Q70EL1 1684 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 SCTRP47872 440 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 ASIC2Q16515 512 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 MEI1Q5TIA1 1274 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 LRRC55Q6ZSA7 311 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 METTL13Q8N6R0 699 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 GLG1Q92896 1179 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 VEZTQ9HBM0 779 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 GPCPD1Q9NPB8 672 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 MINPP1Q9UNW1 487 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 ATP6V0A2Q9Y487 856 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 GLI3P10071 1580 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 RASSF9O75901 435 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 SHBGP04278 402 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 PSEN1P49768 467 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 CDK17Q00537 523 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 AADACL2Q6P093 401 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 MYOCDQ8IZQ8 938 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 CARD10Q9BWT7 1032 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 NOC2LQ9Y3T9 749 aaKnown RBP10.48□□□□□ -0.73
SMC1B-202ENST00000404354 COL4A3BPQ9Y5P4 624 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 MEIS1O00470 390 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 CAND2O75155 1236 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 SERPING1P05155 500 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 VIMP08670 466 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 SLURP2P0DP57 97 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 HNRNPH3P31942 346 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 LRRC14Q15048 493 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 FIGNQ5HY92 759 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 MSL1Q68DK7 614 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 PEX26Q7Z412 305 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 WHAMMQ8TF30 809 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 ELAC2Q9BQ52 826 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 NUP188Q5SRE5 1749 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 ECHS1P30084 290 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 CRKLP46109 303 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 PPP2R2AP63151 447 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 ADAM9Q13443 819 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 SLC18A3Q16572 532 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 ANKRD20A8PQ5CZ79 823 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 ZNF571Q7Z3V5 609 aaPredicted RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 REXO1Q8N1G1 1221 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 PANK4Q9NVE7 773 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 CAMTA1Q9Y6Y1 1673 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 M0R2N6 131 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 KIF4AO95239 1232 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 PEX19P40855 299 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 PLTPP55058 493 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 ITIH3Q06033 890 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 MYO1EQ12965 1108 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 GLE1Q53GS7 698 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 GKAP1Q5VSY0 366 aaPredicted RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 KRT79Q5XKE5 535 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 SLC30A10Q6XR72 485 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 UNC13DQ70J99 1090 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 OTUD6AQ7L8S5 288 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 RPAINQ86UA6 219 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 LRRC47Q8N1G4 583 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 U2AF1L4Q8WU68 220 aaKnown RBP10.47□□□□□ -0.73
SMC1B-202ENST00000404354 C6orf50Q9HD87 102 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 OSGEPQ9NPF4 335 aa10.47□□□□□ -0.73
SMC1B-202ENST00000404354 TMEM110-MUSTN1A8MSY1 372 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 USP17L5A8MUK1 530 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 TRAPPC3O43617 180 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 FGGP02679 453 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 MYBL1P10243 752 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 STAT3P40763 770 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 FAM26FQ5R3K3 315 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 ALKBH5Q6P6C2 394 aaKnown RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 CCDC25Q86WR0 208 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 ARFGAP2Q8N6H7 521 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 STAMBPL1Q96FJ0 436 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 KIAA1024Q9UPX6 916 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 SNX24Q9Y343 169 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 CLIC2O15247 247 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 PJA2O43164 708 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 ORC4O43929 436 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 EZRP15311 586 aaKnown RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 SLC16A2P36021 539 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 HSPA9P38646 679 aaKnown RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 HSPA2P54652 639 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 IFI35P80217 286 aaPredicted RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 FKBP3Q00688 224 aaKnown RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 KCNH2Q12809 1159 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 COASYQ13057 564 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 C6orf89Q6UWU4 347 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 KIF2BQ8N4N8 673 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 RNF10Q8N5U6 811 aaKnown RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 ISCUQ9H1K1 167 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 DNAJC17Q9NVM6 304 aaKnown RBP10.46□□□□□ -0.73
SMC1B-202ENST00000404354 SLC12A6Q9UHW9 1150 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 STK38LQ9Y2H1 464 aa10.46□□□□□ -0.73
SMC1B-202ENST00000404354 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.74
SMC1B-202ENST00000404354 IL6STP40189 918 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms