RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 NEK11Q8NG66 645 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 VCPKMTQ9H867 229 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 FEM1BQ9UK73 627 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 PLAGL2Q9UPG8 496 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 MSH4O15457 936 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
LINC00649-202ENST00000400353 STAT3P40763 770 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 SNAP25P60880 206 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 HERVK_113P62684 666 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 LRRC41Q15345 812 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 CATSPER3Q86XQ3 398 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 GJA10Q969M2 543 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 TUFT1Q9NNX1 390 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 ANO9A1A5B4 782 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 OPLAHO14841 1288 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 IRF6O14896 467 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 CETN3O15182 167 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 EYA4O95677 639 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 GAP43P17677 238 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 PTGER2P43116 358 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 KLK7P49862 253 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 VAV2P52735 878 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 BRD3Q15059 726 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 ATRIPQ8WXE1 791 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
LINC00649-202ENST00000400353 P2RX7Q99572 595 aaKnown RBP11.88□□□□□ -0.51
LINC00649-202ENST00000400353 TANGO6Q9C0B7 1094 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 MMRN2Q9H8L6 949 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 VAV3Q9UKW4 847 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 ZNRF3Q9ULT6 936 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 MYO6Q9UM54 1294 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 GUCA1BQ9UMX6 200 aa11.88□□□□□ -0.51
LINC00649-202ENST00000400353 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 FAM86B1E9PN63 330 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CALUO43852 315 aaPredicted RBP11.87□□□□□ -0.51
LINC00649-202ENST00000400353 RAD17O75943 681 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 LCA5LO95447 670 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 FAM86B2P0C5J1 330 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 SPATA31C1P0DKV0 1188 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
LINC00649-202ENST00000400353 GIT2Q14161 759 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 FAM83BQ5T0W9 1011 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 PDXDC1Q6P996 788 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 KCTD10Q9H3F6 313 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CEP72Q9P209 647 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 TRAF3IP3Q9Y228 551 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 SSU72P8A0A1W2PR75 194 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 DPEP1P16444 411 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CAP2P40123 477 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 ECE1P42892 770 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 AMPD2Q01433 879 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 MAP3K10Q02779 954 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CKAP4Q07065 602 aaKnown RBP11.87□□□□□ -0.51
LINC00649-202ENST00000400353 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 BMT2Q1RMZ1 405 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 CACNA2D4Q7Z3S7 1137 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 RPGRIP1Q96KN7 1286 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 PURBQ96QR8 312 aaKnown RBP11.87□□□□□ -0.51
LINC00649-202ENST00000400353 DEFB129Q9H1M3 183 aa11.87□□□□□ -0.51
LINC00649-202ENST00000400353 IGLV3-22A0A075B6J6 115 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 ZRANB2O95218 330 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 ASNSP08243 561 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 GABPB1Q06547 395 aaPredicted RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 PPP2R5CQ13362 524 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 PAPD7Q5XG87 772 aaKnown RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 TRIM59Q8IWR1 403 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 SPICE1Q8N0Z3 855 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 ZNF526Q8TF50 670 aaPredicted RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 SLC5A5Q92911 643 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 EEF2KMTQ96G04 330 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 ZBED3Q96IU2 234 aaPredicted RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 EIF2AK1Q9BQI3 630 aaKnown RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 DEF6Q9H4E7 631 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 VEZTQ9HBM0 779 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 LUC7LQ9NQ29 371 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms