RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 USP17L11C9JVI0 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L18D6R9N7 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L22D6RA61 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L17D6RBQ6 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L19D6RCP7 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L20D6RJB6 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L24Q0WX57 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 ARID5BQ14865 1188 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 PPP1R12CQ9BZL4 782 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 STK38LQ9Y2H1 464 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 RFX7Q2KHR2 1363 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 LPXNO60711 386 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 TTC19Q6DKK2 380 aaPredicted RBP19.73■□□□□ 0.75
COL18A1-204ENST00000400337 BAIAP2L1Q9UHR4 511 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 A0A1B0GUA9 196 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 PPP4R1Q8TF05 950 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 RUNDC3BQ96NL0 473 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 FAM114A2Q9NRY5 505 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 TACC3Q9Y6A5 838 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 UTYO14607 1347 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 TULP4Q9NRJ4 1543 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 POC1B-GALNT4F8VUJ3 575 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 APBA1Q02410 837 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 FAM83BQ5T0W9 1011 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 PHLDB2Q86SQ0 1253 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 LMNTD2Q8IXW0 634 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 ZNF579Q8NAF0 562 aaKnown RBP19.72■□□□□ 0.75
COL18A1-204ENST00000400337 JRKLQ9Y4A0 524 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 SETD1BQ9UPS6 1966 aaKnown RBP19.72■□□□□ 0.75
COL18A1-204ENST00000400337 KCNQ2O43526 872 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 LMNB2Q03252 620 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 SGO2Q562F6 1265 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.72■□□□□ 0.75
COL18A1-204ENST00000400337 ALX1Q15699 326 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 RNF207Q6ZRF8 634 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 PPP1R16BQ96T49 567 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 NRKQ7Z2Y5 1582 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 USP31Q70CQ4 1352 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 PLTPP55058 493 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 UNC13DQ70J99 1090 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 FAM81BQ96LP2 452 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 CFAP57Q96MR6 1250 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 AP5M1Q9H0R1 490 aa19.72■□□□□ 0.75
COL18A1-204ENST00000400337 MFAP3LO75121 409 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 SAT1P21673 171 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 PPP4R3CPQ6ZMV5 832 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 NLRP7Q8WX94 980 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 ADAMTS1Q9UHI8 967 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 MROH7-TTC4A0A0A0MT08 1334 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 CD58P19256 250 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 RASSF2P50749 326 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 EPHB4P54760 987 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 TMED8Q6PL24 325 aaPredicted RBP19.71■□□□□ 0.75
COL18A1-204ENST00000400337 UNC13BO14795 1591 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 TRIM49BA6NDI0 452 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L10C9JJH3 530 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 PEX3P56589 373 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 ARMC9Q7Z3E5 817 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 UBN2Q6ZU65 1347 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 OATP04181 439 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 HOXA7P31268 230 aaPredicted RBP19.71■□□□□ 0.75
COL18A1-204ENST00000400337 PODNQ7Z5L7 613 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 EXOC8Q8IYI6 725 aa19.71■□□□□ 0.75
COL18A1-204ENST00000400337 VCX3BQ9H321 246 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 WDR70Q9NW82 654 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 LAMC1P11047 1609 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 ECE2O60344 883 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 SRGAP2CP0DJJ0 459 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 DNAJC24Q6P3W2 148 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 FMR1NBQ8N0W7 255 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-204ENST00000400337 C7orf31Q8N865 590 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 ATP8A1Q9Y2Q0 1164 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 ABCD1P33897 745 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 TSNAXIP1Q2TAA8 658 aa19.7■□□□□ 0.74
COL18A1-204ENST00000400337 FAM84BQ96KN1 310 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-204ENST00000400337 MARK3P27448 753 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 ATG9AQ7Z3C6 839 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 SNX25Q9H3E2 840 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 IREB2P48200 963 aaKnown RBP19.69■□□□□ 0.74
COL18A1-204ENST00000400337 RCAN1P53805 252 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 MKRN3Q13064 507 aaKnown RBP19.69■□□□□ 0.74
COL18A1-204ENST00000400337 C10orf76Q5T2E6 689 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 MRPL47Q9HD33 250 aaKnown RBP19.69■□□□□ 0.74
COL18A1-204ENST00000400337 TMEM260Q9NX78 707 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 K7ERI5 159 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 KRT1P04264 644 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 RSPH3Q86UC2 560 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 MTA3Q9BTC8 594 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 CAPN7Q9Y6W3 813 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 ECEL1O95672 775 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 DYNLT1P63172 113 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 GRM4Q14833 912 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 SARM1Q6SZW1 724 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 IFNAR2P48551 515 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 ALCAMQ13740 583 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 ALKBH5Q6P6C2 394 aaKnown RBP19.69■□□□□ 0.74
COL18A1-204ENST00000400337 SCYL1Q96KG9 808 aa19.69■□□□□ 0.74
COL18A1-204ENST00000400337 RNF14Q9UBS8 474 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms