RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 PABPC4Q13310 644 aaKnown RBP eCLIP17.41■□□□□ 0.382e-10■□□□□ 9.8
CDC42-203ENST00000400259 EPM2AIP1Q7L775 607 aaPredicted RBP17.41■□□□□ 0.38
CDC42-203ENST00000400259 OTOP1Q7RTM1 612 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 HSD17B14Q9BPX1 270 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 REEP2Q9BRK0 252 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 GLIS2Q9BZE0 524 aaPredicted RBP17.41■□□□□ 0.38
CDC42-203ENST00000400259 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 NHEJ1Q9H9Q4 299 aaPredicted RBP17.41■□□□□ 0.38
CDC42-203ENST00000400259 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 TBC1D7Q9P0N9 293 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 EML1O00423 815 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 LDHDQ86WU2 507 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 NAPGQ99747 312 aaPredicted RBP17.41■□□□□ 0.38
CDC42-203ENST00000400259 MYH11P35749 1972 aa17.41■□□□□ 0.38
CDC42-203ENST00000400259 DOCK1Q14185 1865 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 MEIS1O00470 390 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
CDC42-203ENST00000400259 TNIP1Q15025 636 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 BMT2Q1RMZ1 405 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
CDC42-203ENST00000400259 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
CDC42-203ENST00000400259 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 EPHB6O15197 1021 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 RPS12P25398 132 aaKnown RBP17.4■□□□□ 0.38
CDC42-203ENST00000400259 HSD17B4P51659 736 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 SETQ01105 290 aaPredicted RBP17.4■□□□□ 0.38
CDC42-203ENST00000400259 GHRHRQ02643 423 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
CDC42-203ENST00000400259 CEP55Q53EZ4 464 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 LRCH2Q5VUJ6 765 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 JDP2Q8WYK2 163 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 TEPSINQ96N21 525 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 FBXO28Q9NVF7 368 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 TRAF3IP3Q9Y228 551 aa17.4■□□□□ 0.38
CDC42-203ENST00000400259 ICAM1P05362 532 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 TNFAIP1Q13829 316 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 RASA3Q14644 834 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 CCDC40Q4G0X9 1142 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 NELFCDQ8IXH7 590 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 BAP1Q92560 729 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 LPAR1Q92633 364 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 RABGGTAQ92696 567 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 FAM207AQ9NSI2 230 aaPredicted RBP17.39■□□□□ 0.37
CDC42-203ENST00000400259 FAM184BQ9ULE4 1060 aa17.39■□□□□ 0.37
CDC42-203ENST00000400259 WDR46O15213 610 aaKnown RBP17.38■□□□□ 0.37
CDC42-203ENST00000400259 IPO7O95373 1038 aaKnown RBP17.38■□□□□ 0.37
CDC42-203ENST00000400259 PRELPP51888 382 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 RAD51AP2Q09MP3 1159 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 SRGAP1Q7Z6B7 1085 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 SFR1Q86XK3 245 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 GPR161Q8N6U8 529 aaKnown RBP17.38■□□□□ 0.37
CDC42-203ENST00000400259 CEP112Q8N8E3 955 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 EHBP1Q8NDI1 1231 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 EPC1Q9H2F5 836 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 BHMT2Q9H2M3 363 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 MMRN2Q9H8L6 949 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 ZNF536O15090 1300 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 LCA5LO95447 670 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 CASP5P51878 434 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 CYP4A11Q02928 519 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 KCNMA1Q12791 1236 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 KNOP1Q1ED39 458 aaKnown RBP17.38■□□□□ 0.37
CDC42-203ENST00000400259 B3GNT9Q6UX72 402 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 GOLGA1Q92805 767 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 RUSC1Q9BVN2 902 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 WDR11Q9BZH6 1224 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 KIAA1683Q9H0B3 1180 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 OLFML3Q9NRN5 406 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 RGL1Q9NZL6 768 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 OGFRQ9NZT2 677 aa17.38■□□□□ 0.37
CDC42-203ENST00000400259 SHTN1A0MZ66 631 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 KRT86O43790 486 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 SLITRK3O94933 977 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 ZSCAN20P17040 1043 aaPredicted RBP17.37■□□□□ 0.37
CDC42-203ENST00000400259 GAP43P17677 238 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 INPP5BP32019 993 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 TUBB4BP68371 445 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 AMPD2Q01433 879 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 CCDC122Q5T0U0 273 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 NEK11Q8NG66 645 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 PURBQ96QR8 312 aaKnown RBP17.37■□□□□ 0.37
CDC42-203ENST00000400259 TRIM10Q9UDY6 481 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 GUCA1BQ9UMX6 200 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 NFKBIEO00221 500 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 PDXKO00764 312 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 CETN3O15182 167 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 HOXD13P35453 343 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 CLCN6P51797 869 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 ADAM9Q13443 819 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 WHAMMP3Q1A5X7 153 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 RINT1Q6NUQ1 792 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 KIAA1328Q86T90 577 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 PRPF38AQ8NAV1 312 aaKnown RBP17.37■□□□□ 0.37
CDC42-203ENST00000400259 JAKMIP2Q96AA8 810 aa17.37■□□□□ 0.37
CDC42-203ENST00000400259 NUCKS1Q9H1E3 243 aaKnown RBP17.37■□□□□ 0.37
CDC42-203ENST00000400259 ZHX3Q9H4I2 956 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms