RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ZNF790Q6PG37 636 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 ENOX1Q8TC92 643 aaKnown RBP8□□□□□ -1.13
CSNK2A1-204ENST00000400227 EAF2Q96CJ1 260 aaPredicted RBP8□□□□□ -1.13
CSNK2A1-204ENST00000400227 ASCC2Q9H1I8 757 aaPredicted RBP8□□□□□ -1.13
CSNK2A1-204ENST00000400227 COL15A1P39059 1388 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 SYCE3A1L190 88 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 HIP1O00291 1037 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 LARGE1O95461 756 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 ZSCAN22P10073 491 aaPredicted RBP8□□□□□ -1.13
CSNK2A1-204ENST00000400227 AIMP1Q12904 312 aaKnown RBP8□□□□□ -1.13
CSNK2A1-204ENST00000400227 SNW1Q13573 536 aaKnown RBP8□□□□□ -1.13
CSNK2A1-204ENST00000400227 AUHQ13825 339 aaKnown RBP8□□□□□ -1.13
CSNK2A1-204ENST00000400227 VPS53Q5VIR6 699 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 CCDC144CPQ8IYA2 1237 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 PRDM14Q9GZV8 571 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 C19orf44Q9H6X5 657 aa8□□□□□ -1.13
CSNK2A1-204ENST00000400227 CCDC171Q6TFL3 1326 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 NUP188Q5SRE5 1749 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 JCADQ9P266 1359 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ESR1P03372 595 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 CPA1P15085 419 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 CASTP20810 708 aaKnown RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ETFBP38117 255 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 RFX5P48382 616 aaPredicted RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ST3GAL1Q11201 340 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 GCKRQ14397 625 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 CLEC16AQ2KHT3 1053 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ADCK5Q3MIX3 580 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 TNNI3KQ59H18 835 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 EPHA10Q5JZY3 1008 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 TMC3Q7Z5M5 1100 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ZSCAN30Q86W11 494 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 SYTL5Q8TDW5 730 aaPredicted RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 MAP4K1Q92918 833 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ZSCAN31Q96LW9 406 aaPredicted RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 JAKMIP1Q96N16 626 aaKnown RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 HDAC8Q9BY41 377 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 CCDC8Q9H0W5 538 aaPredicted RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ZNF408Q9H9D4 720 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 CARS2Q9HA77 564 aaKnown RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 PDRG1Q9NUG6 133 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 PRKAG3Q9UGI9 489 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 DUSP13Q9UII6 198 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 PCDHB12Q9Y5F1 795 aa7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 RBM8AQ9Y5S9 174 aaKnown RBP7.99□□□□□ -1.13
CSNK2A1-204ENST00000400227 UBR2Q8IWV8 1755 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 MED23Q9ULK4 1368 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 DCCP43146 1447 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 TJP1Q07157 1748 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 SMAD7O15105 426 aaKnown RBP7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 SHOXO15266 292 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 STX6O43752 255 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 SYT1P21579 422 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 AXDND1Q5T1B0 1012 aaPredicted RBP7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 CREB3L3Q68CJ9 461 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 SLC23A3Q6PIS1 610 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 COPS6Q7L5N1 327 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 CREG2Q8IUH2 290 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 C7orf61Q8IZ16 206 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 IFNL2Q8IZJ0 200 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 SYAP1Q96A49 352 aaPredicted RBP7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 ZNF496Q96IT1 587 aaPredicted RBP7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 FAM227BQ96M60 508 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 MYD88Q99836 296 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 ALDH8A1Q9H2A2 487 aaPredicted RBP7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 TSPY26PQ9H489 355 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 PRR13Q9NZ81 148 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 SMC3Q9UQE7 1217 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 CYP46A1Q9Y6A2 500 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 LAMA4Q16363 1823 aa7.98□□□□□ -1.13
CSNK2A1-204ENST00000400227 XIRP1Q702N8 1843 aaKnown RBP7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 A0A0D9SFI3 127 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 SLC27A2O14975 620 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 SIGLEC6O43699 453 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 TP53P04637 393 aaPredicted RBP7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 SNRPA1P09661 255 aaKnown RBP7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 MYL6BP14649 208 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 NEXNQ0ZGT2 675 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 ZNF792Q3KQV3 632 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 RABL6Q3YEC7 729 aaPredicted RBP7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 DCAF15Q66K64 600 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 CCDC83Q8IWF9 413 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 DAGLBQ8NCG7 672 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 NAP1L5Q96NT1 182 aaPredicted RBP7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 MBNL3Q9NUK0 354 aaKnown RBP7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 ADGRE2Q9UHX3 823 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 ADAMTS6Q9UKP5 1117 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 FBXL21Q9UKT6 434 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 PCDHB10Q9UN67 800 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 MTMR6Q9Y217 621 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 CNPY2Q9Y2B0 182 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 PAPPAQ13219 1627 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 TNS3Q68CZ2 1445 aa7.97□□□□□ -1.13
CSNK2A1-204ENST00000400227 CYP27B1O15528 508 aa7.96□□□□□ -1.13
CSNK2A1-204ENST00000400227 PRAMEF1O95521 474 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms