RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 GIT2Q14161 759 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 LONRF2Q1L5Z9 754 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 EDRF1Q3B7T1 1238 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 TRIM59Q8IWR1 403 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 ZC3H3Q8IXZ2 948 aaKnown RBP15.3■□□□□ 0.04
PRAME-202ENST00000398743 SMCR8Q8TEV9 937 aaPredicted RBP15.3■□□□□ 0.04
PRAME-202ENST00000398743 FAM151AQ8WW52 585 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 HDAC9Q9UKV0 1011 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 VAV3Q9UKW4 847 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 TMX2Q9Y320 296 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.3■□□□□ 0.047e-9■□□□□ 9.3
PRAME-202ENST00000398743 DUSP10Q9Y6W6 482 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 AKR1B10O60218 316 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 ERLIN1O75477 346 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 TUBBP07437 444 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 ADAM9Q13443 819 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 DLGAP5Q15398 846 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 PNKPQ96T60 521 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 NUCKS1Q9H1E3 243 aaKnown RBP15.29■□□□□ 0.04
PRAME-202ENST00000398743 ST7Q9NRC1 585 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 CEP72Q9P209 647 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 FAM184BQ9ULE4 1060 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 PCDHA13Q9Y5I0 950 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 RXRBP28702 533 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 CYP2W1Q8TAV3 490 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 ACER1Q8TDN7 264 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 REEP2Q9BRK0 252 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 FUT8Q9BYC5 575 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 STK32BQ9NY57 414 aa15.29■□□□□ 0.04
PRAME-202ENST00000398743 ZNF70Q9UC06 446 aaPredicted RBP15.29■□□□□ 0.04
PRAME-202ENST00000398743 CETN3O15182 167 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 CKAP4Q07065 602 aaKnown RBP15.28■□□□□ 0.04
PRAME-202ENST00000398743 TERF2Q15554 542 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 FAM83BQ5T0W9 1011 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 KCTD17Q8N5Z5 321 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
PRAME-202ENST00000398743 RPGRIP1Q96KN7 1286 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
PRAME-202ENST00000398743 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 ZBTB21Q9ULJ3 1066 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 IGLV3-22A0A075B6J6 115 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 SSU72P8A0A1W2PR75 194 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 RAD17O75943 681 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 CFBP00751 764 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 NR2F2P24468 414 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 EPS15P42566 896 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
PRAME-202ENST00000398743 KIAA1755Q5JYT7 1200 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 RTKN2Q8IZC4 609 aa15.28■□□□□ 0.04
PRAME-202ENST00000398743 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
PRAME-202ENST00000398743 LSM14BQ9BX40 385 aaKnown RBP15.28■□□□□ 0.04
PRAME-202ENST00000398743 SRGAP2O75044 1071 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 TACC1O75410 805 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 VIL1P09327 827 aaKnown RBP15.27■□□□□ 0.04
PRAME-202ENST00000398743 CASP5P51878 434 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 SFR1Q86XK3 245 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 TXLNBQ8N3L3 684 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 TTLL6Q8N841 843 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 SYN2Q92777 582 aaPredicted RBP15.27■□□□□ 0.04
PRAME-202ENST00000398743 PSMD1Q99460 953 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 GBP3Q9H0R5 595 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 BHMT2Q9H2M3 363 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 NLRC4Q9NPP4 1024 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 TRAF3IP3Q9Y228 551 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 RABGAP1Q9Y3P9 1069 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
PRAME-202ENST00000398743 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 NOL4O94818 638 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 EYA4O95677 639 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 KNOP1Q1ED39 458 aaKnown RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 ASTE1Q2TB18 679 aaPredicted RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 TDRD12Q587J7 1177 aaKnown RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 BEND6Q5SZJ8 279 aaPredicted RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 SFMBT2Q5VUG0 894 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 HGSNATQ68CP4 663 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 CCDC174Q6PII3 467 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 LARGE2Q8N3Y3 721 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 MMS19Q96T76 1030 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 GMLQ99445 158 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 UBXN6Q9BZV1 441 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 RANBP17Q9H2T7 1088 aaKnown RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 JADE2Q9NQC1 790 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 CNTNAP1P78357 1384 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 EML1O00423 815 aa15.26■□□□□ 0.03
PRAME-202ENST00000398743 CALUO43852 315 aaPredicted RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 TBCAO75347 108 aaKnown RBP15.26■□□□□ 0.03
PRAME-202ENST00000398743 MAGEA1P43355 309 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms