RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 INO80B-WBP1J3KQ70 363 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 RNF8O76064 485 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 OSBPP22059 807 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 ARL1P40616 181 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 ADAT2Q7Z6V5 191 aaKnown RBP15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 INO80BQ9C086 356 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 SALL3Q9BXA9 1300 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 STAM2O75886 525 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 ADCY8P40145 1251 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 RASA3Q14644 834 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 C10orf67Q8IYJ2 551 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 UBE2Q2Q8WVN8 375 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 PCDHA13Q9Y5I0 950 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 IGBP1P78318 339 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 TBC1D10BQ4KMP7 808 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 FYB2Q5VWT5 728 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 PPP1R2P3Q6NXS1 205 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 PDXDC2PQ6P474 469 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 GUF1Q8N442 669 aaKnown RBP15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 FAM71BQ8TC56 605 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 RSAD2Q8WXG1 361 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 ZNF653Q96CK0 615 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 KRT12Q99456 494 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 PCDHB4Q9Y5E5 795 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 MEGF6O75095 1541 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 TBC1D8O95759 1140 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 USP11P51784 963 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 ITIH3Q06033 890 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 MTERF2Q49AM1 385 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 HHATQ5VTY9 493 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 NAA35Q5VZE5 725 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 CCSER1Q9C0I3 900 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 MTMR4Q9NYA4 1195 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 E9PMD0 336 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 PGRMC1O00264 195 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 FDPSP14324 419 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 DPP9Q86TI2 863 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 METTL16Q86W50 562 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 CCDC117Q8IWD4 279 aaPredicted RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 GABPB2Q8TAK5 448 aaPredicted RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 PIGOQ8TEQ8 1089 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 P3H4Q92791 437 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 RUNDC3BQ96NL0 473 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 VPS37BQ9H9H4 285 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 TYW1Q9NV66 732 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 PRELPP51888 382 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 JAK3P52333 1124 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 CFAP157Q5JU67 520 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 CCDC125Q86Z20 511 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 DHX40Q8IX18 779 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 ADAMTS1Q9UHI8 967 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 PP2D1A8MPX8 630 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 FOXN1O15353 648 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 ABCB11O95342 1321 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 FLT1P17948 1338 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 VPS41P49754 854 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 ALKBH5Q6P6C2 394 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 MAGOHBQ96A72 148 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 UBE2TQ9NPD8 197 aaPredicted RBP15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 ABHD10Q9NUJ1 306 aa15.47■□□□□ 0.07
PCDHGA11-201ENST00000398587 TDP2O95551 362 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 SFR1Q86XK3 245 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 BBOF1Q8ND07 529 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 RMDN3Q96TC7 470 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 TBC1D22BQ9NU19 505 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 POTEB3A0JP26 581 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 POTECB2RU33 542 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 MOCS3O95396 460 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 INPP5BP32019 993 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 KCNB1Q14721 858 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 POTEBQ6S5H4 581 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 RABEP2Q9H5N1 569 aa15.46■□□□□ 0.07
PCDHGA11-201ENST00000398587 CTDNEP1O95476 244 aa15.46■□□□□ 0.06
PCDHGA11-201ENST00000398587 COASYQ13057 564 aa15.46■□□□□ 0.06
PCDHGA11-201ENST00000398587 TTC31Q49AM3 519 aaPredicted RBP15.46■□□□□ 0.06
PCDHGA11-201ENST00000398587 FAM47CQ5HY64 1035 aa15.46■□□□□ 0.06
PCDHGA11-201ENST00000398587 PBKQ96KB5 322 aa15.46■□□□□ 0.06
PCDHGA11-201ENST00000398587 STRIP1Q5VSL9 837 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 HEXIM1O94992 359 aaKnown RBP15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 HSPA6P17066 643 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 MAN1A1P33908 653 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 ARHGAP25P42331 645 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 EPHB4P54760 987 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 MTMR1Q13613 665 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 KRT81Q14533 505 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 ARMC9Q7Z3E5 817 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 RASSF4Q9H2L5 321 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 SFI1A8K8P3 1242 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 IQCB1Q15051 598 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 SCYL2Q6P3W7 929 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 PRPF38AQ8NAV1 312 aaKnown RBP15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 ANKRD36BP1Q96IX9 119 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 PDE11AQ9HCR9 933 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 FAM114A2Q9NRY5 505 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms