RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 IMPACTQ9P2X3 320 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 PARP2Q9UGN5 583 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 TMEM221A6NGB7 291 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 PRLRP16471 622 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 YBX3P16989 372 aaKnown RBP eCLIP7.21□□□□□ -1.251e-6■■■□□ 16
TM9SF4-202ENST00000398022 KBTBD3Q8NAB2 608 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 STIM2Q9P246 746 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 LCMT1Q9UIC8 334 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 MCM8Q9UJA3 840 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 DBNLQ9UJU6 430 aaKnown RBP7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 FBXO10Q9UK96 956 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 CCPG1Q9ULG6 757 aa7.21□□□□□ -1.25
TM9SF4-202ENST00000398022 TOR1BO14657 336 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 MBD4O95243 580 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 MCM3P25205 808 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 GNL1P36915 607 aaPredicted RBP7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 SCRN1Q12765 414 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 TFCP2Q12800 502 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 BTG3Q14201 252 aaPredicted RBP7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 COPS6Q7L5N1 327 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 IQUBQ8NA54 791 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 KCT2Q8NC54 265 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 KLHDC4Q8TBB5 520 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 MAML3Q96JK9 1138 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 TTPALQ9BTX7 342 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 DSCC1Q9BVC3 393 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 GPR108Q9NPR9 543 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 HERC5Q9UII4 1024 aaKnown RBP7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 TRAF3IP3Q9Y228 551 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 GAKO14976 1311 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 KCNJ13O60928 360 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 SLU7O95391 586 aaKnown RBP7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 CYP21A2P08686 494 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 SFPQP23246 707 aaKnown RBP eCLIP7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 DNAJB2P25686 324 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 MTHFRP42898 656 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 METTL24Q5JXM2 366 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF790Q6PG37 636 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 BTNL9Q6UXG8 535 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 NSUN7Q8NE18 718 aaKnown RBP7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 KCNG4Q8TDN1 519 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 KAZALD1Q96I82 304 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 MTFR1LQ9H019 292 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC5A4Q9NY91 659 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 RIMKLBQ9ULI2 386 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 MRPL11Q9Y3B7 192 aaKnown RBP7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 SH3TC1Q8TE82 1336 aa7.21□□□□□ -1.26
TM9SF4-202ENST00000398022 TTC34A8MYJ7 566 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ENPP3O14638 875 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP8B1O43520 1251 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 IGKV5-2P06315 115 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 IVLP07476 585 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 XRCC5P13010 732 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 SMTNP53814 917 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 LRRC74AQ0VAA2 488 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 KIF22Q14807 665 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 NCCRP1Q6ZVX7 275 aaPredicted RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 RAPH1Q70E73 1250 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 AOPEPQ8N6M6 819 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 EDC3Q96F86 508 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 CEP295NLQ96MC4 621 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 TSGA13Q96PP4 275 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 LRRC2Q9BYS8 371 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 VCPKMTQ9H867 229 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 SEPT11Q9NVA2 429 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 TUBGCP4Q9UGJ1 667 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ZC3H7BQ9UGR2 993 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 HEG1Q9ULI3 1381 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ABLIM1O14639 778 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP9BO43861 1147 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 PIP5K1CO60331 668 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 MYCP01106 439 aaPredicted RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 C11orf57Q6ZUT1 292 aaPredicted RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 CEP68Q76N32 757 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 TAOK1Q7L7X3 1001 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 UBE3BQ7Z3V4 1068 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 FBXO18Q8NFZ0 1043 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF274Q96GC6 653 aaPredicted RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 USP28Q96RU2 1077 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 PAIP2BQ9ULR5 123 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF510Q9Y2H8 683 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 USP16Q9Y5T5 823 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 NDUFB5O43674 189 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 EVI5O60447 810 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 COBLO75128 1261 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 SNRPA1P09661 255 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 TATP17735 454 aaPredicted RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC16A2P36021 539 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 HSD17B2P37059 387 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 APOBRQ0VD83 1088 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 SNW1Q13573 536 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 LRP8Q14114 963 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 NFE2Q16621 373 aaPredicted RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 CEP57Q86XR8 500 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 SPICE1Q8N0Z3 855 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 DBNDD2Q9BQY9 259 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 MRPL9Q9BYD2 267 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 RYDENQ9NUL5 291 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 ARGLU1Q9NWB6 273 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms