RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MED15Q96RN5 788 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 EPN1Q9Y6I3 576 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 TARSL2A2RTX5 802 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 IQCA1LA6NCM1 817 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 GZMAP12544 262 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CYP11B2P19099 503 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PPATQ06203 517 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PDE4DQ08499 809 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 KYAT1Q16773 422 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CROCCP2Q86T23 111 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CLIC6Q96NY7 704 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 TSPYL1Q9H0U9 437 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 DMAC2Q9NW81 257 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 KCNH4Q9UQ05 1017 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 SMCHD1A6NHR9 2005 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CALUO43852 315 aaPredicted RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CCNT1O60563 726 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 MAP3K9P80192 1104 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 GRB10Q13322 594 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 ERCC4Q92889 916 aaPredicted RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PNMA5Q96PV4 448 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PHACTR1Q9C0D0 580 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CDC23Q9UJX2 597 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 VAV3Q9UKW4 847 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 KCNA3P22001 575 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 EFCAB13Q8IY85 973 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 DDX12PQ92771 950 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 ACBD3Q9H3P7 528 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 VIPAS39Q9H9C1 493 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 GJB4Q9NTQ9 266 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 GARTP22102 1010 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 SCNN1DP51172 638 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 KIF5AQ12840 1032 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 FOXD4L6Q3SYB3 417 aaPredicted RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 WDR93Q6P2C0 686 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 FOXD4L3Q6VB84 417 aaPredicted RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF280CQ8ND82 737 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 LMBR1Q8WVP7 490 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 FBXL18Q96ME1 805 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 TEKT3Q9BXF9 490 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PNMA3Q9UL41 463 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 KIAA0100Q14667 2235 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PPP1R37O75864 691 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 SURF1Q15526 300 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 DNTTIP2Q5QJE6 756 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 TMC2Q8TDI7 906 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 ANKRD7Q92527 254 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 STRA6Q9BX79 667 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 INTS13Q9NVM9 706 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 GAS7O60861 476 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PIGRP01833 764 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 BMS1Q14692 1282 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CCDC144CPQ8IYA2 1237 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 UBXN4Q92575 508 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PURBQ96QR8 312 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 SBF1O95248 1867 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PLA2G4BP0C869 781 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 XRCC5P13010 732 aaKnown RBP6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PRELPP51888 382 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 BPIFB4P59827 614 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 MAP9Q49MG5 647 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 KMT5BQ4FZB7 885 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 ERO1BQ86YB8 467 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 MXRA8Q9BRK3 442 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 PLVAPQ9BX97 442 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 ABHD10Q9NUJ1 306 aa6.47□□□□□ -1.37
PTPRD-206ENST00000397617 YDJCA8MPS7 323 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 QARSP47897 775 aaKnown RBP6.46□□□□□ -1.37
PTPRD-206ENST00000397617 SMTNP53814 917 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 APBA1Q02410 837 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 KNOP1Q1ED39 458 aaKnown RBP6.46□□□□□ -1.37
PTPRD-206ENST00000397617 ARMCX5Q6P1M9 558 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 CCDC42Q96M95 316 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 JADE2Q9NQC1 790 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 NRBP1Q9UHY1 535 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 NCOR1O75376 2440 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 CEP290O15078 2479 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 NFKBIEO00221 500 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 NDC80O14777 642 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 NMT2O60551 498 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 CCT6AP40227 531 aaKnown RBP6.46□□□□□ -1.37
PTPRD-206ENST00000397617 PSMC5P62195 406 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 STK4Q13043 487 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 NEDD9Q14511 834 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 EARS2Q5JPH6 523 aaKnown RBP6.46□□□□□ -1.37
PTPRD-206ENST00000397617 DBNDD1Q9H9R9 158 aa6.46□□□□□ -1.37
PTPRD-206ENST00000397617 USP17L15C9J2P7 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L13C9JLJ4 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L11C9JVI0 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L18D6R9N7 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L22D6RA61 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L17D6RBQ6 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L19D6RCP7 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L20D6RJB6 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 IPO5O00410 1097 aaKnown RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 ATP1A3P13637 1013 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms