RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RPA1P27694 616 aa26.44■■□□□ 1.82
TSPAN4-202ENST00000397396 RRAGBQ5VZM2 374 aa26.44■■□□□ 1.82
TSPAN4-202ENST00000397396 CCDC62Q6P9F0 684 aa26.44■■□□□ 1.82
TSPAN4-202ENST00000397396 CEP57L1Q8IYX8 460 aa26.44■■□□□ 1.82
TSPAN4-202ENST00000397396 FLRT1Q9NZU1 646 aa26.44■■□□□ 1.82
TSPAN4-202ENST00000397396 ZSWIM8A7E2V4 1837 aa26.44■■□□□ 1.82
TSPAN4-202ENST00000397396 DKC1O60832 514 aaKnown RBP eCLIP26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 GGPS1O95749 300 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 CDC25AP30304 524 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 STAT6P42226 847 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 KARSQ15046 597 aaKnown RBP26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 CCL14Q16627 93 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 MIS18BP1Q6P0N0 1132 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 RAET1EQ8TD07 263 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 EIF2AK1Q9BQI3 630 aaKnown RBP26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 MMTAG2Q9BU76 263 aaKnown RBP26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 MLXIPQ9HAP2 919 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 STK17AQ9UEE5 414 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 SAMM50Q9Y512 469 aa26.43■■□□□ 1.82
TSPAN4-202ENST00000397396 FARP2O94887 1054 aaPredicted RBP26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 GH1P01241 217 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 LY6KQ17RY6 165 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 CELF3Q5SZQ8 465 aaKnown RBP26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 CCDC183Q5T5S1 534 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 CYFIP1Q7L576 1253 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 DHX37Q8IY37 1157 aaKnown RBP26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 ELOA2Q8IYF1 753 aaPredicted RBP26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 PDILTQ8N807 584 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 PXYLP1Q8TE99 480 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 ANP32EQ9BTT0 268 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 PCDHA10Q9Y5I2 948 aa26.42■■□□□ 1.82
TSPAN4-202ENST00000397396 EML1O00423 815 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 CTAGE5O15320 804 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 ARIH2O95376 493 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 P4HBP07237 508 aaKnown RBP26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 PSAPP07602 524 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 CYP2C19P33261 490 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 SP2Q02086 613 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 LAMC2Q13753 1193 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 DUSP28Q4G0W2 176 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 TMEM119Q4V9L6 283 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 CNNM3Q8NE01 707 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 EMID1Q96A84 441 aaPredicted RBP26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 DHX58Q96C10 678 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 NUP62CLQ9H1M0 184 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 CLSTN2Q9H4D0 955 aa26.41■■□□□ 1.82
TSPAN4-202ENST00000397396 SLFN14P0C7P3 912 aa26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 ACTR2P61160 394 aa26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 ZRSR1Q15695 479 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 CAVIN1Q6NZI2 390 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 KRBA2Q6ZNG9 492 aa26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 TRIB2Q92519 343 aa26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 HSD17B14Q9BPX1 270 aa26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 PDGFCQ9NRA1 345 aa26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 FAM184BQ9ULE4 1060 aa26.4■■□□□ 1.82
TSPAN4-202ENST00000397396 NOP56O00567 594 aaKnown RBP26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 CCNE2O96020 404 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 HMGCRP04035 888 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 PLCG1P19174 1290 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 ADCYAP1R1P41586 468 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 GRB10Q13322 594 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 E2F4Q16254 413 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 CATSPER3Q86XQ3 398 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 SLAIN1Q8ND83 568 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 ATP6V0A1Q93050 837 aa26.39■■□□□ 1.82
TSPAN4-202ENST00000397396 ADCY3O60266 1144 aa26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 LETM1O95202 739 aaPredicted RBP26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 ZNF865P0CJ78 1059 aaPredicted RBP26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 TNFAIP2Q03169 654 aa26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 CCDC144BQ3MJ40 725 aa26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 SEPT1Q8WYJ6 367 aa26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 PANK2Q9BZ23 570 aa26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 LRRC27Q9C0I9 530 aa26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 ZSWIM4Q9H7M6 989 aa26.39■■□□□ 1.81
TSPAN4-202ENST00000397396 A0A087X0B3 334 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 POTEB3A0JP26 581 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 ACTN4O43707 911 aaKnown RBP26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 MED24O75448 989 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 ATG7O95352 703 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 SUPT20HL2P0C7V6 817 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 SPATA31C1P0DKV0 1188 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 AKR1A1P14550 325 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 QARSP47897 775 aaKnown RBP26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 PSMC5P62195 406 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 POTEBQ6S5H4 581 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 ABHD15Q6UXT9 468 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 DYDC2Q96IM9 177 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 SPATA33Q96N06 139 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 PNMA5Q96PV4 448 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 LXNQ9BS40 222 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 TNMDQ9H2S6 317 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 SERTAD1Q9UHV2 236 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 TSKSQ9UJT2 592 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 DNM3Q9UQ16 869 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 Q9Y3F1 56 aa26.38■■□□□ 1.81
TSPAN4-202ENST00000397396 SLITRK3O94933 977 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 LYPLA2O95372 231 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 MYL1P05976 194 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 CYBAP13498 195 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 AMPD3Q01432 767 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms