RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 MMGT1Q8N4V1 131 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 COL22A1Q8NFW1 1626 aaPredicted RBP17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 GLI1P08151 1106 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 GNGT1P63211 74 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 HGSNATQ68CP4 663 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 ZFPM1Q8IX07 1006 aa17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 CCDC43Q96MW1 224 aaKnown RBP17.49■□□□□ 0.39
ATP2A3-206ENST00000397043 CLIC2O15247 247 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 SLC9A1P19634 815 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 ZNF76P36508 570 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 CASP5P51878 434 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 PSMC6P62333 389 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 TMEM119Q4V9L6 283 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 AENQ8WTP8 325 aaKnown RBP17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 ARL8AQ96BM9 186 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 ATP6V0A2Q9Y487 856 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 PCDHB13Q9Y5F0 798 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 MED24O75448 989 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 SMARCA1P28370 1054 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 HOXA13P31271 388 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 EPHB4P54760 987 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 TRADDQ15628 312 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 PPP4R3AQ6IN85 833 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 BCAS4Q8TDM0 211 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 PCDHAC2Q9Y5I4 1007 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 hCG_1984214I3L0E3 225 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 CHMP2AO43633 222 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 NOL4O94818 638 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 MAATS1Q7Z4T9 603 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 PROM2Q8N271 834 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 CERS5Q8N5B7 392 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 MSL3Q8N5Y2 521 aaKnown RBP17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 ZNF713Q8N859 430 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 CAPS2Q9BXY5 557 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 ANO3Q9BYT9 981 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 SAMM50Q9Y512 469 aa17.48■□□□□ 0.39
ATP2A3-206ENST00000397043 BBOX1O75936 387 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 GDF11O95390 407 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 CFAP58Q5T655 872 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 FAM107BQ9H098 131 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 BCAS3Q9H6U6 928 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 HDAC9Q9UKV0 1011 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 CEP104O60308 925 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 FAM153BP0C7A2 387 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 CYP11B2P19099 503 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 CDC37Q16543 378 aaPredicted RBP17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 FAM153CQ494X1 144 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 IFT20Q8IY31 132 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 SPICE1Q8N0Z3 855 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 DBNDD1Q9H9R9 158 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 ARMCX3Q9UH62 379 aaPredicted RBP17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 FAM153AQ9UHL3 310 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
ATP2A3-206ENST00000397043 OPA1O60313 960 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 GYS1P13807 737 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 SHMT1P34896 483 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 AP1M1Q9BXS5 423 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 TSPYL1Q9H0U9 437 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 SEPT11Q9NVA2 429 aaKnown RBP17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 SSU72P8A0A1W2PR75 194 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 GCNT3O95395 438 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 EEF2P13639 858 aaKnown RBP17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 PDCLQ13371 301 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 VPS72Q15906 364 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 SLFN13Q68D06 897 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 DNM3Q9UQ16 869 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 ZC3H4Q9UPT8 1303 aaKnown RBP17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 SPDYE3A6NKU9 549 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 RSPH10B2B2RC85 870 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 PPEF1O14829 653 aaPredicted RBP17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 PPFIA4O75335 1185 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 RSPH10BP0C881 870 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 PTK2Q05397 1052 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 SLC18A3Q16572 532 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 CDC42EP5Q6NZY7 148 aa17.46■□□□□ 0.39
ATP2A3-206ENST00000397043 GAKO14976 1311 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 PPFIA1Q13136 1202 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 COBLL1Q53SF7 1204 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 TMX4Q9H1E5 349 aaPredicted RBP17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 BHMT2Q9H2M3 363 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 IKZF4Q9H2S9 585 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 KCNQ5Q9NR82 932 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 MYBP10242 640 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 XRCC5P13010 732 aaKnown RBP17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 IRAK1P51617 712 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 GABPAQ06546 454 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 GJB7Q6PEY0 223 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 CATSPER3Q86XQ3 398 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 TRIM59Q8IWR1 403 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 FAM163AQ96GL9 167 aaPredicted RBP17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 ZIM3Q96PE6 472 aa17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
ATP2A3-206ENST00000397043 HPDP32754 393 aaPredicted RBP17.44■□□□□ 0.38
ATP2A3-206ENST00000397043 UBXN2AP68543 259 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms