RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 NELFCDQ8IXH7 590 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 ACRBPQ8NEB7 543 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 ZNF577Q9BSK1 485 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 BHMT2Q9H2M3 363 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 COL4A3BPQ9Y5P4 624 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 COL11A1P12107 1806 aaPredicted RBP16.56■□□□□ 0.24
CBX3-202ENST00000396386 TRAF5O00463 557 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 FANCGO15287 622 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 CHMP2AO43633 222 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 TBCAO75347 108 aaKnown RBP16.56■□□□□ 0.24
CBX3-202ENST00000396386 FLOT1O75955 427 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 GNA14O95837 355 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 VCAM1P19320 739 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 MUTP22033 750 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 KLK7P49862 253 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 NBPF12Q5TAG4 269 aaPredicted RBP16.56■□□□□ 0.24
CBX3-202ENST00000396386 SFR1Q86XK3 245 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 SCFD1Q8WVM8 642 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 CLEC4DQ8WXI8 215 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 WDR24Q96S15 920 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 TEKT3Q9BXF9 490 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 SLC38A10Q9HBR0 1119 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 LZTFL1Q9NQ48 299 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 ZNHIT6Q9NWK9 470 aaKnown RBP16.56■□□□□ 0.24
CBX3-202ENST00000396386 RGL1Q9NZL6 768 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 PNMA2Q9UL42 364 aa16.56■□□□□ 0.24
CBX3-202ENST00000396386 NFIBO00712 420 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 NKRFO15226 690 aaKnown RBP eCLIP16.55■□□□□ 0.242e-11■□□□□ 8.6
CBX3-202ENST00000396386 KIF5CO60282 957 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 URI1O94763 535 aaPredicted RBP16.55■□□□□ 0.24
CBX3-202ENST00000396386 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
CBX3-202ENST00000396386 MEA1Q16626 185 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 ARHGAP29Q52LW3 1261 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 SCYL3Q8IZE3 742 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 ZNF397Q8NF99 534 aaPredicted RBP16.55■□□□□ 0.24
CBX3-202ENST00000396386 HSD17B14Q9BPX1 270 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 MXRA8Q9BRK3 442 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 RUSC1Q9BVN2 902 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 KCTD10Q9H3F6 313 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 AS3MTQ9HBK9 375 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 PPP1R9AQ9ULJ8 1098 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 SIK3Q9Y2K2 1263 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 CTDP1Q9Y5B0 961 aaPredicted RBP16.55■□□□□ 0.24
CBX3-202ENST00000396386 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
CBX3-202ENST00000396386 RASSF10A6NK89 507 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 NDUFA10O95299 355 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 ALAS1P13196 640 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 DGKZQ13574 1117 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 CTTNQ14247 550 aaKnown RBP16.54■□□□□ 0.24
CBX3-202ENST00000396386 EDRF1Q3B7T1 1238 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 NIPA1Q7RTP0 329 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 ZC3H3Q8IXZ2 948 aaKnown RBP16.54■□□□□ 0.24
CBX3-202ENST00000396386 CPXCR1Q8N123 301 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 SAMD3Q8N6K7 520 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 CHP1Q99653 195 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 UNC45AQ9H3U1 944 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 RPAP3Q9H6T3 665 aaPredicted RBP16.54■□□□□ 0.24
CBX3-202ENST00000396386 RAVER2Q9HCJ3 691 aaKnown RBP16.54■□□□□ 0.24
CBX3-202ENST00000396386 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 RLFQ13129 1914 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 ARP10275 920 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 BCRP11274 1271 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 GAP43P17677 238 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 RIT2Q99578 217 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 PDCL3Q9H2J4 239 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 MAP3K20Q9NYL2 800 aaKnown RBP16.54■□□□□ 0.24
CBX3-202ENST00000396386 COL20A1Q9P218 1284 aa16.54■□□□□ 0.24
CBX3-202ENST00000396386 EPN1Q9Y6I3 576 aaPredicted RBP16.54■□□□□ 0.24
CBX3-202ENST00000396386 IPO5O00410 1097 aaKnown RBP16.53■□□□□ 0.24
CBX3-202ENST00000396386 ZBED4O75132 1171 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 FDX1P10109 184 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 MARSP56192 900 aaKnown RBP16.53■□□□□ 0.24
CBX3-202ENST00000396386 EPHA7Q15375 998 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
CBX3-202ENST00000396386 WDR59Q6PJI9 974 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 EPM2AIP1Q7L775 607 aaPredicted RBP16.53■□□□□ 0.24
CBX3-202ENST00000396386 TPH2Q8IWU9 490 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 NEK9Q8TD19 979 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
CBX3-202ENST00000396386 LOC285556D6RIA3 1793 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 A0A0U1RQJ8 604 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 SLITRK3O94933 977 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 CYLC1P35663 651 aaPredicted RBP16.52■□□□□ 0.24
CBX3-202ENST00000396386 CASP5P51878 434 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 RINT1Q6NUQ1 792 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 SLC30A10Q6XR72 485 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 NLGN2Q8NFZ4 835 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 WRNIP1Q96S55 665 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 MYH11P35749 1972 aa16.52■□□□□ 0.24
CBX3-202ENST00000396386 RSPH10B2B2RC85 870 aa16.52■□□□□ 0.23
CBX3-202ENST00000396386 FAM13AO94988 1023 aa16.52■□□□□ 0.23
CBX3-202ENST00000396386 RSPH10BP0C881 870 aa16.52■□□□□ 0.23
CBX3-202ENST00000396386 CDK17Q00537 523 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms