RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 ARHGAP39Q9C0H5 1083 aa12.76□□□□□ -0.37
LST1-212ENST00000396101 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
LST1-212ENST00000396101 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
LST1-212ENST00000396101 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
LST1-212ENST00000396101 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
LST1-212ENST00000396101 C19orf81C9J6K1 198 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 H3BRJ5 948 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 FOXP2O15409 715 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 ALX3O95076 343 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 IGHA2P01877 340 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 MYH7P12883 1935 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 EDN3P14138 238 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 MCMDC2Q4G0Z9 681 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 SIAH1Q8IUQ4 282 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 ERO1AQ96HE7 468 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 PARK7Q99497 189 aaKnown RBP12.75□□□□□ -0.37
LST1-212ENST00000396101 FEZ1Q99689 392 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 ASCC2Q9H1I8 757 aaPredicted RBP12.75□□□□□ -0.37
LST1-212ENST00000396101 MKNK2Q9HBH9 465 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 INCENPQ9NQS7 918 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 LATS2Q9NRM7 1088 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 HELLSQ9NRZ9 838 aa12.75□□□□□ -0.37
LST1-212ENST00000396101 ARPP21Q9UBL0 812 aaPredicted RBP12.75□□□□□ -0.37
LST1-212ENST00000396101 BAZ2AQ9UIF9 1905 aaKnown RBP12.75□□□□□ -0.37
LST1-212ENST00000396101 A0A1W2PRG0 241 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 CCDC85CA6NKD9 419 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 ADAM11O75078 769 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 PRDM1O75626 825 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 CD68P34810 354 aaPredicted RBP12.74□□□□□ -0.37
LST1-212ENST00000396101 CWC27Q6UX04 472 aaKnown RBP12.74□□□□□ -0.37
LST1-212ENST00000396101 ZNF589Q86UQ0 364 aaPredicted RBP12.74□□□□□ -0.37
LST1-212ENST00000396101 SKAP1Q86WV1 359 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
LST1-212ENST00000396101 CCDC17Q96LX7 622 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
LST1-212ENST00000396101 BHLHE41Q9C0J9 482 aaPredicted RBP12.74□□□□□ -0.37
LST1-212ENST00000396101 NAPBQ9H115 298 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 BRPF3Q9ULD4 1205 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 SLC45A1Q9Y2W3 748 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 DOCK1Q14185 1865 aa12.74□□□□□ -0.37
LST1-212ENST00000396101 ADGRA2Q96PE1 1338 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 PEX10O60683 326 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 CTGFP29279 349 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 CDC25BP30305 580 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 PSMC4P43686 418 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
LST1-212ENST00000396101 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
LST1-212ENST00000396101 TTC22Q5TAA0 569 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 KLHL23Q8NBE8 558 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 FOXD4L4Q8WXT5 416 aaPredicted RBP12.73□□□□□ -0.37
LST1-212ENST00000396101 KIAA1683Q9H0B3 1180 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 PHIPQ8WWQ0 1821 aa12.73□□□□□ -0.37
LST1-212ENST00000396101 FGAP02671 866 aa12.72□□□□□ -0.37
LST1-212ENST00000396101 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
LST1-212ENST00000396101 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
LST1-212ENST00000396101 HOXA7P31268 230 aaPredicted RBP12.72□□□□□ -0.37
LST1-212ENST00000396101 PPARAQ07869 468 aa12.72□□□□□ -0.37
LST1-212ENST00000396101 PABPC4Q13310 644 aaKnown RBP eCLIP12.72□□□□□ -0.37
LST1-212ENST00000396101 KIF22Q14807 665 aa12.72□□□□□ -0.37
LST1-212ENST00000396101 KIAA1755Q5JYT7 1200 aa12.72□□□□□ -0.37
LST1-212ENST00000396101 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
LST1-212ENST00000396101 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
LST1-212ENST00000396101 AGGF1Q8N302 714 aaeCLIP12.72□□□□□ -0.37
LST1-212ENST00000396101 WNT8BQ93098 351 aa12.72□□□□□ -0.37
LST1-212ENST00000396101 DIAPH3Q9NSV4 1193 aa12.72□□□□□ -0.37
LST1-212ENST00000396101 HSPD1P10809 573 aaKnown RBP12.71□□□□□ -0.37
LST1-212ENST00000396101 IRX3P78415 501 aaPredicted RBP12.71□□□□□ -0.37
LST1-212ENST00000396101 ARHGEF6Q15052 776 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 ALX1Q15699 326 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 PRSS36Q5K4E3 855 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 FBXO46Q6PJ61 603 aaPredicted RBP12.71□□□□□ -0.37
LST1-212ENST00000396101 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 KANSL2Q9H9L4 492 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 GNEQ9Y223 722 aaKnown RBP12.71□□□□□ -0.37
LST1-212ENST00000396101 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
LST1-212ENST00000396101 ATAD5Q96QE3 1844 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 HTTP42858 3142 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 SLC3A2P08195 630 aaKnown RBP12.7□□□□□ -0.38
LST1-212ENST00000396101 VCAM1P19320 739 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 USP14P54578 494 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 ICA1Q05084 483 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 FAM47AQ5JRC9 791 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 FAM117BQ6P1L5 589 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 CATSPERGQ6ZRH7 1159 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 VN1R5Q7Z5H4 357 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 SPICE1Q8N0Z3 855 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 TMX2Q9Y320 296 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 LAMB1P07942 1786 aa12.7□□□□□ -0.38
LST1-212ENST00000396101 CCDC171Q6TFL3 1326 aa12.69□□□□□ -0.38
LST1-212ENST00000396101 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
LST1-212ENST00000396101 CENPFP49454 3210 aa12.69□□□□□ -0.38
LST1-212ENST00000396101 PTPRFP10586 1907 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms