RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 PLS1Q14651 629 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 ASRGL1Q7L266 308 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 LRP10Q7Z4F1 713 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 RAB11FIP4Q86YS3 637 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 RBBP8NLQ8NC74 664 aaPredicted RBP10.56□□□□□ -0.72
CDRT1-204ENST00000395906 IRGQQ8WZA9 623 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 MYD88Q99836 296 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 ABCF3Q9NUQ8 709 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 HSFX1Q9UBD0 423 aa10.56□□□□□ -0.72
CDRT1-204ENST00000395906 SALL1Q9NSC2 1324 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 BIRC5O15392 142 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 PRPF3O43395 683 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 RAD21O60216 631 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 ITGA2BP08514 1039 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 TPBGLP0DKB5 382 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 KCNA3P22001 575 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 PLCD1P51178 756 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 GUCY2FP51841 1108 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 PSMC1P62191 440 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 HERVK_113P62684 666 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 BNIP1Q12981 228 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 MUM1Q2TAK8 710 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 SMUG1Q53HV7 270 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 CFAP157Q5JU67 520 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 SLC9C2Q5TAH2 1124 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 KSR2Q6VAB6 950 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 NEK1Q96PY6 1258 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 PPP1R12CQ9BZL4 782 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 CYP39A1Q9NYL5 469 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 TSKSQ9UJT2 592 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 MYH13Q9UKX3 1938 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 C5P01031 1676 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 SEMA3EO15041 775 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 IGKV5-2P06315 115 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 RHBDL3P58872 404 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 GPSM2P81274 684 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 DUS1LQ6P1R4 473 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 KLC3Q6P597 504 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 DZIP1Q86YF9 867 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 KIF2BQ8N4N8 673 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 ENDOVQ8N8Q3 282 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 TRIML1Q8N9V2 468 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 LSM14AQ8ND56 463 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 IFT81Q8WYA0 676 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 TAOK3Q9H2K8 898 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 LARSQ9P2J5 1176 aaKnown RBP10.55□□□□□ -0.72
CDRT1-204ENST00000395906 INTUQ9ULD6 942 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 RABL2BQ9UNT1 228 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 ITM2BQ9Y287 266 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 STK24Q9Y6E0 443 aa10.55□□□□□ -0.72
CDRT1-204ENST00000395906 H0YGN5 161 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 RGL2O15211 777 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 CTNND1O60716 968 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 CHGBP05060 677 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 SARSP49591 514 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 CLCN2P51788 898 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 MTTPP55157 894 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 HPCAP84074 193 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 PPARAQ07869 468 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 NMIQ13287 307 aaPredicted RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 KRT72Q14CN4 511 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 SLC39A14Q15043 492 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 PUS10Q3MIT2 529 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 CCNJLQ8IV13 435 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 NME8Q8N427 588 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 ABTB1Q969K4 478 aaPredicted RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 DHTKD1Q96HY7 919 aaPredicted RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 PBKQ96KB5 322 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 SNX27Q96L92 541 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 MED15Q96RN5 788 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 NAP1L3Q99457 506 aaPredicted RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 NSRP1Q9H0G5 558 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 C9orf78Q9NZ63 289 aaPredicted RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 NFS1Q9Y697 457 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 PEX11AO75192 247 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 UBTFL1P0CB47 393 aaPredicted RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 SKIP12755 728 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 TCP1P17987 556 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 PAFAH1B1P43034 410 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 PPARDQ03181 441 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 ZNF844Q08AG5 666 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 MORC3Q14149 939 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 NT5DC1Q5TFE4 455 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 SPATA1Q5VX52 437 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 SCUBE1Q8IWY4 988 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 HAUS1Q96CS2 278 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 ZNF333Q96JL9 665 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 FAM227BQ96M60 508 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 PURBQ96QR8 312 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 CHP1Q99653 195 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms