RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 HDAC7Q8WUI4 952 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 PDS5AQ29RF7 1337 aaKnown RBP15.86■□□□□ 0.13
SREBF1-205ENST00000395757 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-205ENST00000395757 MYH3P11055 1940 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 IL1R1P14778 569 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 KCNH2Q12809 1159 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 CEP89Q96ST8 783 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 KRT12Q99456 494 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 AP1M1Q9BXS5 423 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 PACSIN1Q9BY11 444 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 NT5C3AQ9H0P0 336 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 CUEDC2Q9H467 287 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 FAM204AQ9H8W3 233 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 RIC8AQ9NPQ8 531 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 RABGAP1Q9Y3P9 1069 aa15.86■□□□□ 0.13
SREBF1-205ENST00000395757 PPP1R12BO60237 982 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-205ENST00000395757 HPDP32754 393 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-205ENST00000395757 PBX1P40424 430 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 VAV2P52735 878 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 GUCY2DQ02846 1103 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 CCDC127Q96BQ5 260 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 HDAC9Q9UKV0 1011 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 EXOC3O60645 756 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 PRPHP41219 470 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 CASP5P51878 434 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 UHMK1Q8TAS1 419 aaKnown RBP15.85■□□□□ 0.13
SREBF1-205ENST00000395757 LRRC1Q9BTT6 524 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 FUT8Q9BYC5 575 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 MYH6P13533 1939 aa15.85■□□□□ 0.13
SREBF1-205ENST00000395757 CCDC169A6NNP5 214 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 HARSP12081 509 aaKnown RBP15.84■□□□□ 0.13
SREBF1-205ENST00000395757 GJC1P36383 396 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 CASP4P49662 377 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 CDAN1Q8IWY9 1227 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 ELOA2Q8IYF1 753 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-205ENST00000395757 MASTLQ96GX5 879 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 RIOX1Q9H6W3 641 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 GOLGA8IPA6NC78 632 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 GOLGA8JA6NMD2 632 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 PALMO75781 387 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 EPB41P11171 864 aaKnown RBP15.84■□□□□ 0.13
SREBF1-205ENST00000395757 DGKZQ13574 1117 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 ZSCAN26Q16670 478 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 ODR4Q5SWX8 454 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 HS2ST1Q7LGA3 356 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 SWAP70Q9UH65 585 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 ZSCAN5CA6NGD5 496 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-205ENST00000395757 PDE2AO00408 941 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-205ENST00000395757 EXOC3L4Q17RC7 722 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 TRIM58Q8NG06 486 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 HAS1Q92839 578 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 DYDC2Q96IM9 177 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 REEP2Q9BRK0 252 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
SREBF1-205ENST00000395757 CATSPER3Q86XQ3 398 aa15.83■□□□□ 0.13
SREBF1-205ENST00000395757 TMEM39BQ9GZU3 492 aa15.83■□□□□ 0.13
SREBF1-205ENST00000395757 CCDC113Q9H0I3 377 aa15.83■□□□□ 0.13
SREBF1-205ENST00000395757 ARHGEF35A5YM69 484 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 EN1Q05925 392 aaPredicted RBP15.83■□□□□ 0.12
SREBF1-205ENST00000395757 FAM178BQ8IXR5 827 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 GUF1Q8N442 669 aaKnown RBP15.83■□□□□ 0.12
SREBF1-205ENST00000395757 ABCB11O95342 1321 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 ITIH6Q6UXX5 1313 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 TESPA1A2RU30 521 aaPredicted RBP15.83■□□□□ 0.12
SREBF1-205ENST00000395757 ATP2C2O75185 946 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 WDR78Q5VTH9 848 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 RSRC2Q7L4I2 434 aaKnown RBP15.83■□□□□ 0.12
SREBF1-205ENST00000395757 CCDC17Q96LX7 622 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 CRAMP1Q96RY5 1269 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 ARHGEF10LQ9HCE6 1279 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 MYO1AQ9UBC5 1043 aa15.83■□□□□ 0.12
SREBF1-205ENST00000395757 GOLGA6BA6NDN3 693 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 RNF40O75150 1001 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 EIF2AK2P19525 551 aaKnown RBP15.82■□□□□ 0.12
SREBF1-205ENST00000395757 DPH5Q9H2P9 285 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 EPB41L5Q9HCM4 733 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 DMGDHQ9UI17 866 aaKnown RBP15.82■□□□□ 0.12
SREBF1-205ENST00000395757 LRRIQ3A6PVS8 624 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-205ENST00000395757 VPS36Q86VN1 386 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 DHX36Q9H2U1 1008 aaKnown RBP15.82■□□□□ 0.12
SREBF1-205ENST00000395757 GCNT4Q9P109 453 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 CALCOCO1Q9P1Z2 691 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 TMEM150BA6NC51 233 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 ADRA2BP18089 450 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 MIIPQ5JXC2 388 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 ZNF746Q6NUN9 644 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-205ENST00000395757 DAGLBQ8NCG7 672 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 MYH8P13535 1937 aa15.82■□□□□ 0.12
SREBF1-205ENST00000395757 A0A1W2PQC6 194 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 TLDC2A0PJX2 215 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 FAM86B1E9PN63 330 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 FAM86B2P0C5J1 330 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 KRT13P13646 458 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 STAT2P52630 851 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 DUOX1Q9NRD9 1551 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 LRRC10BA6NIK2 292 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 ZNF263O14978 683 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 CYP11B2P19099 503 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 ZNF507Q8TCN5 953 aa15.81■□□□□ 0.12
SREBF1-205ENST00000395757 NFU1Q9UMS0 254 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms