RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 DHX9Q08211 1270 aaKnown RBP15.69■□□□□ 0.1
CLIP2-203ENST00000395060 NAB2Q15742 525 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 KSR1Q8IVT5 923 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 RAPGEF5Q92565 580 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
CLIP2-203ENST00000395060 SEC63Q9UGP8 760 aaKnown RBP15.69■□□□□ 0.1
CLIP2-203ENST00000395060 BCS1LQ9Y276 419 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 HMGB1P1B2RPK0 211 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 E9PMD0 336 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 CHUKO15111 745 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 SLCO1A2P46721 670 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 ASIC2Q16515 512 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 MEI1Q5TIA1 1274 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 UNC13DQ70J99 1090 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 PNMA8AQ86V59 439 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 MYOCDQ8IZQ8 938 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 SEC16BQ96JE7 1060 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 ATP6V0A2Q9Y487 856 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 COL4A3BPQ9Y5P4 624 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 NHSL1Q5SYE7 1610 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 TIAM2Q8IVF5 1701 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 SERPING1P05155 500 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 ITIH3Q06033 890 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 CYB5D1Q6P9G0 228 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 ZNF572Q7Z3I7 529 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 TCP11Q8WWU5 503 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 SLC24A3Q9HC58 644 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 C6orf50Q9HD87 102 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 GPCPD1Q9NPB8 672 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 ABCB4P21439 1286 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 GRM4Q14833 912 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 HERC4Q5GLZ8 1057 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 SEPT11Q9NVA2 429 aaKnown RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 ARPP21Q9UBL0 812 aaPredicted RBP15.68■□□□□ 0.1
CLIP2-203ENST00000395060 PNMA2Q9UL42 364 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 NR2E1Q9Y466 385 aa15.68■□□□□ 0.1
CLIP2-203ENST00000395060 ROBO1Q9Y6N7 1651 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 MYL1P05976 194 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 ZNF211Q13398 564 aaPredicted RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 PPP1R7Q15435 360 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 GLE1Q53GS7 698 aaKnown RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 PARP9Q8IXQ6 854 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 BANK1Q8NDB2 785 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 WHAMMQ8TF30 809 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 ANKS1AQ92625 1134 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 TPX2Q9ULW0 747 aaKnown RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 NOC2LQ9Y3T9 749 aaKnown RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 GNPATO15228 680 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 PJA2O43164 708 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 BUB1BO60566 1050 aaPredicted RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 CLTAP09496 248 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 COASYQ13057 564 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 SNCBQ16143 134 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 SLC18A3Q16572 532 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 KRT79Q5XKE5 535 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 HIBCHQ6NVY1 386 aaPredicted RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 DAAM2Q86T65 1068 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 CACNA2D3Q8IZS8 1091 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 LRRC47Q8N1G4 583 aaKnown RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 METTL13Q8N6R0 699 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.67■□□□□ 0.19e-7■■■■■ 93.7
CLIP2-203ENST00000395060 PANK4Q9NVE7 773 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 CHORDC1Q9UHD1 332 aaPredicted RBP15.67■□□□□ 0.1
CLIP2-203ENST00000395060 TAF1P21675 1872 aa15.67■□□□□ 0.1
CLIP2-203ENST00000395060 USP17L5A8MUK1 530 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 FGRP09769 529 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 KRT25Q7Z3Z0 450 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 NBPF5PQ86XG9 351 aaPredicted RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 IKZF4Q9H2S9 585 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 CTNND1O60716 968 aaKnown RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 LCA5LO95447 670 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 ECHS1P30084 290 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 SMTNP53814 917 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 FAM26FQ5R3K3 315 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 UBAP2Q5T6F2 1119 aaKnown RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 ZNF571Q7Z3V5 609 aaPredicted RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 TAX1BP1Q86VP1 789 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 FAM228AQ86W67 206 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 AMIGO3Q86WK7 504 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 FUKQ8N0W3 1084 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 RNF10Q8N5U6 811 aaKnown RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 AK8Q96MA6 479 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 ATP8A2Q9NTI2 1148 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 CEP72Q9P209 647 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 THRAP3Q9Y2W1 955 aaKnown RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 ZNF804BA4D1E1 1349 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 KIF4AO95239 1232 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 FGFR1OPO95684 399 aaKnown RBP15.66■□□□□ 0.1
CLIP2-203ENST00000395060 SHBGP04278 402 aa15.66■□□□□ 0.1
CLIP2-203ENST00000395060 FKBP3Q00688 224 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms