RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 A0A0A6YYK5 440 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 POTEMA6NI47 508 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 SLC37A4O43826 429 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 PPP1R37O75864 691 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 TDP2O95551 362 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 KRT18P05783 430 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 PLCB4Q15147 1175 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 DIXDC1Q155Q3 683 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 ERMNQ8TAM6 284 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 ACTRT1Q8TDG2 376 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 PSMB7Q99436 277 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 KRT12Q99456 494 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 METTL14Q9HCE5 456 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 TMEM260Q9NX78 707 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 FBXL5Q9UKA1 691 aa11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 DIS3Q9Y2L1 958 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-208ENST00000394803 USP17L5A8MUK1 530 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 VGLL3A8MV65 326 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 GCOM1H8Y6P7 765 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 CALUO43852 315 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 NOL4O94818 638 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 MYZAPP0CAP1 466 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 RPL13P26373 211 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 CARSP49589 748 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 USP11P51784 963 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 TXNRD3Q86VQ6 643 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 CCDC26Q8TAB7 109 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 ARL8AQ96BM9 186 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 SPAG5Q96R06 1193 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 PLEKHA4Q9H4M7 779 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 SLITRK6Q9H5Y7 841 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 EMILIN3Q9NT22 766 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 FOCADQ5VW36 1801 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 H0YHG0 523 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 PGRMC1O00264 195 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 TTLL1O95922 423 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 GLI1P08151 1106 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 TM4SF1P30408 202 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 LSP1P33241 339 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 MDH1P40925 334 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 NPEPPSP55786 919 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 ADAM9Q13443 819 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 SPDYCQ5MJ68 293 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 MAATS1Q7Z4T9 603 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 ANKRD13CQ8N6S4 541 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 SALL4Q9UJQ4 1053 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 TMEM59LQ9UK28 342 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 RTCBQ9Y3I0 505 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 GAKO14976 1311 aa11.01□□□□□ -0.65
UBE2D3-208ENST00000394803 SLC16A3O15427 465 aaKnown RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 FSBPO95073 299 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 KIF4AO95239 1232 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 AFPP02771 609 aaKnown RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 CCDC172P0C7W6 258 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 PLA2G4BP0C869 781 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 MYBP10242 640 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 IL1R1P14778 569 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 GUCY2CP25092 1073 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 KLRC1P26715 233 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 PRKCIP41743 596 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 HLTFQ14527 1009 aaKnown RBP eCLIP11□□□□□ -0.65
UBE2D3-208ENST00000394803 LRRC41Q15345 812 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 HERC4Q5GLZ8 1057 aaPredicted RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 SWT1Q5T5J6 900 aaKnown RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 GPBP1Q86WP2 473 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 ZBTB9Q96C00 473 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 GANQ9H2C0 597 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 ARMCX3Q9UH62 379 aaPredicted RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 JAG2Q9Y219 1238 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 SUGT1Q9Y2Z0 365 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 MYH7BA7E2Y1 1941 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 KCNK3O14649 394 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 ZBTB5O15062 677 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 TBX3O15119 743 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 PPP1R12BO60237 982 aaPredicted RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 TLR2O60603 784 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 FTCDO95954 541 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 SSBP05455 408 aaKnown RBP eCLIP11□□□□□ -0.65
UBE2D3-208ENST00000394803 ZNF543Q08ER8 600 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 PDCLQ13371 301 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 CNPY4Q8N129 248 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 CASKIN2Q8WXE0 1202 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 COA7Q96BR5 231 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 MS4A14Q96JA4 679 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 NAP1L3Q99457 506 aaPredicted RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 BUD13Q9BRD0 619 aaKnown RBP eCLIP11□□□□□ -0.655e-7■■■■□ 24.9
UBE2D3-208ENST00000394803 TACO1Q9BSH4 297 aaKnown RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 UBA5Q9GZZ9 404 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 ACTR5Q9H9F9 607 aaPredicted RBP11□□□□□ -0.65
UBE2D3-208ENST00000394803 TMBIM4Q9HC24 238 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM114A2Q9NRY5 505 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
UBE2D3-208ENST00000394803 A0A087X0T9 212 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms