RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CTTNBP2NLQ9P2B4 639 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 FGFR4P22455 802 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 TUBB4BP68371 445 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 SLC20A2Q08357 652 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 GSTA5Q7RTV2 222 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 TRAPPC11Q7Z392 1133 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 STAG2Q8N3U4 1231 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 ENAHQ8N8S7 591 aaPredicted RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 STAG1Q8WVM7 1258 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 SOCS7O14512 581 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 TTI1O43156 1089 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 SPOPO43791 374 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 BMP15O95972 392 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 FGGP02679 453 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 MMP10P09238 476 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 EEF2P13639 858 aaKnown RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 TM4SF1P30408 202 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 KCNJ6P48051 423 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 ATP11AP98196 1134 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 PUM3Q15397 648 aaKnown RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 CYB5D1Q6P9G0 228 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 USP17L2Q6R6M4 530 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 FMNL3Q8IVF7 1028 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 LRRC47Q8N1G4 583 aaKnown RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 COA7Q96BR5 231 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 RPGRIP1Q96KN7 1286 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 TMEM60Q9H2L4 133 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 RBM28Q9NW13 759 aaKnown RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 SMCO2A6NFE2 343 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 GFPT2O94808 682 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 PDE8BO95263 885 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 MDH1P40925 334 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 TBX2Q13207 712 aaPredicted RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 ZNF746Q6NUN9 644 aaPredicted RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 NBPF5PQ86XG9 351 aaPredicted RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 NLGN1Q8N2Q7 840 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 PNMA1Q8ND90 353 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 HNRNPLLQ8WVV9 542 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 CALR3Q96L12 384 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 DBR1Q9UK59 544 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 QSER1Q2KHR3 1735 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 TRIM28Q13263 835 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 TTLL11Q8NHH1 800 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 ATP6V1G3Q96LB4 118 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 AZI2Q9H6S1 392 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 DISC1Q9NRI5 854 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 SPATS2LQ9NUQ6 558 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 TMOD4Q9NZQ9 345 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 USTQ9Y2C2 406 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 TXNDC9O14530 226 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 NTSR2O95665 410 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 KLRC1P26715 233 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 STX2P32856 288 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 CYP2J2P51589 502 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 CNNM4Q6P4Q7 775 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 TGFBRAP1Q8WUH2 860 aa9.63□□□□□ -0.87
RTN4-206ENST00000394611 ZKSCAN4Q969J2 545 aaPredicted RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 CRNKL1Q9BZJ0 848 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 REXO2Q9Y3B8 237 aaKnown RBP9.63□□□□□ -0.87
RTN4-206ENST00000394611 H7C1W4 665 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 DDX39AO00148 427 aaKnown RBP9.62□□□□□ -0.87
RTN4-206ENST00000394611 EPHB6O15197 1021 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 SERPINB2P05120 415 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 SP4Q02446 784 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 ACCSLQ4AC99 568 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 NSMFQ6X4W1 530 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 CLEC10AQ8IUN9 316 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 TTC16Q8NEE8 873 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 CCDC26Q8TAB7 109 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 MTMR8Q96EF0 704 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 PRMT1Q99873 361 aaKnown RBP9.62□□□□□ -0.87
RTN4-206ENST00000394611 NSRP1Q9H0G5 558 aaKnown RBP9.62□□□□□ -0.87
RTN4-206ENST00000394611 TMEM260Q9NX78 707 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 RAB21Q9UL25 225 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 N4BP2Q86UW6 1770 aaPredicted RBP9.62□□□□□ -0.87
RTN4-206ENST00000394611 FOXO6A8MYZ6 492 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 POLRMTO00411 1230 aaKnown RBP9.62□□□□□ -0.87
RTN4-206ENST00000394611 MESDQ14696 234 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 MUM1Q2TAK8 710 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 PARP10Q53GL7 1025 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 EMBQ6PCB8 327 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 GLG1Q92896 1179 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 CYTH2Q99418 400 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 EPN3Q9H201 632 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 NPHP3-ACAD11A0A0J9YXS1 232 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 POC1B-GALNT4F8VUJ3 575 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 CALML3P27482 149 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 SLC16A2P36021 539 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 CASP7P55210 303 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 SNAP25P60880 206 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 PTGISQ16647 500 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 UBE2SQ16763 222 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 USH1GQ495M9 461 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 SEPT14Q6ZU15 432 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms