RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RIN2Q8WYP3 895 aaPredicted RBP6.22□□□□□ -1.41
RFFL-202ENST00000394597 TEKT3Q9BXF9 490 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 ANO3Q9BYT9 981 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 VPS16Q9H269 839 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 MMRN2Q9H8L6 949 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.22□□□□□ -1.41
RFFL-202ENST00000394597 SEPT11Q9NVA2 429 aaKnown RBP6.22□□□□□ -1.41
RFFL-202ENST00000394597 LRP6O75581 1613 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 GMPSP49915 693 aaPredicted RBP6.22□□□□□ -1.41
RFFL-202ENST00000394597 ORC2Q13416 577 aaPredicted RBP6.22□□□□□ -1.41
RFFL-202ENST00000394597 GRIK5Q16478 980 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 NBPF9Q3BBW0 867 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 RASIP1Q5U651 963 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 RUFY4Q6ZNE9 571 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 ZNF365Q70YC5 407 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 ARMC9Q7Z3E5 817 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 USP37Q86T82 979 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 ANKRD35Q8N283 1001 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 GBP5Q96PP8 586 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 WRNIP1Q96S55 665 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 PAGR1Q9BTK6 254 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 EHD4Q9H223 541 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 GOLPH3LQ9H4A5 285 aa6.22□□□□□ -1.41
RFFL-202ENST00000394597 NOP53Q9NZM5 478 aaKnown RBP6.22□□□□□ -1.41
RFFL-202ENST00000394597 GAKO14976 1311 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 CNTNAP5Q8WYK1 1306 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 TESPA1A2RU30 521 aaPredicted RBP6.21□□□□□ -1.41
RFFL-202ENST00000394597 SMIM23A6NLE4 172 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 SNUPNO95149 360 aaKnown RBP6.21□□□□□ -1.41
RFFL-202ENST00000394597 MYL1P05976 194 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 CDC25AP30304 524 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 KCNJ6P48051 423 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 CXCL9Q07325 125 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 TBC1D8BQ0IIM8 1120 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 ST3GAL1Q11201 340 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 PAK2Q13177 524 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 SLMAPQ14BN4 828 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 TAF11Q15544 211 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.41
RFFL-202ENST00000394597 NTRK3Q16288 839 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 GPBP1Q86WP2 473 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 PPFIBP2Q8ND30 876 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 CCDC42Q96M95 316 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 CAMKK2Q96RR4 588 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 FAM167BQ9BTA0 163 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 NOC4LQ9BVI4 516 aaKnown RBP6.21□□□□□ -1.41
RFFL-202ENST00000394597 ETAA1Q9NY74 926 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 MAD2L2Q9UI95 211 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 PCDHA6Q9UN73 950 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 PCDHA8Q9Y5H6 950 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 ZHX2Q9Y6X8 837 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 IVNS1ABPQ9Y6Y0 642 aa6.21□□□□□ -1.41
RFFL-202ENST00000394597 PALM3A6NDB9 673 aaPredicted RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 SPDYE2BA6NHP3 402 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 EIF4E1BA6NMX2 242 aaKnown RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 SPDYE6P0CI01 402 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 ERCC5P28715 1186 aaPredicted RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 GUCY2FP51841 1108 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 NNTQ13423 1086 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 APOBEC3HQ6NTF7 200 aaKnown RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 AMIGO3Q86WK7 504 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 CLEC10AQ8IUN9 316 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 VSTM4Q8IW00 320 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 RNF10Q8N5U6 811 aaKnown RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 PAGE5Q96GU1 130 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 RIC8AQ9NPQ8 531 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 KCNQ5Q9NR82 932 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 KIAA1024Q9UPX6 916 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 CD2APQ9Y5K6 639 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 ARFGEF2Q9Y6D5 1785 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L15C9J2P7 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L13C9JLJ4 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L11C9JVI0 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L18D6R9N7 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L22D6RA61 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L17D6RBQ6 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L19D6RCP7 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L20D6RJB6 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 CALUO43852 315 aaPredicted RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 NDUFB10O96000 172 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 HOXA13P31271 388 aaPredicted RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 SMTNP53814 917 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L24Q0WX57 530 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 SPP2Q13103 211 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 SPATA1Q5VX52 437 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 USP17L6PQ6QN14 398 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 TOGARAM2Q6ZUX3 1019 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 REXO1L1PQ8IX06 675 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 MYCT1Q8N699 235 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 SMCR8Q8TEV9 937 aaPredicted RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 LARP4BQ92615 738 aaKnown RBP6.21□□□□□ -1.42
RFFL-202ENST00000394597 JAKMIP2Q96AA8 810 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 OSBPL9Q96SU4 736 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.21□□□□□ -1.42
RFFL-202ENST00000394597 SELENOOQ9BVL4 669 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 TMEM260Q9NX78 707 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 STK17AQ9UEE5 414 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 MAN1B1Q9UKM7 699 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 C5P01031 1676 aa6.21□□□□□ -1.42
RFFL-202ENST00000394597 SOWAHDA6NJG2 315 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms