RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 ARHGAP39Q9C0H5 1083 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 GRPEL1Q9HAV7 217 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 MCM6Q14566 821 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 DAW1Q8N136 415 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 HPS3Q969F9 1004 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 PDGFCQ9NRA1 345 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 NPHP3-ACAD11A0A0J9YXS1 232 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 TMEM150BA6NC51 233 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
PDGFD-202ENST00000393158 FARP2O94887 1054 aaPredicted RBP12.13□□□□□ -0.47
PDGFD-202ENST00000393158 PMS1P54277 932 aaKnown RBP12.13□□□□□ -0.47
PDGFD-202ENST00000393158 LRCH2Q5VUJ6 765 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
PDGFD-202ENST00000393158 CPA4Q9UI42 421 aa12.13□□□□□ -0.47
PDGFD-202ENST00000393158 CYP11B2P19099 503 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
PDGFD-202ENST00000393158 AFMP43652 599 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 GCLCP48506 637 aaPredicted RBP12.12□□□□□ -0.47
PDGFD-202ENST00000393158 MAPK7Q13164 816 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 ABHD15Q6UXT9 468 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 FAM13BQ9NYF5 915 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 FBXO40Q9UH90 709 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 IGSF9BQ9UPX0 1349 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 ZBTB42B2RXF5 422 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 LETM1O95202 739 aaPredicted RBP12.12□□□□□ -0.47
PDGFD-202ENST00000393158 NLRP12P59046 1061 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 SNX29Q8TEQ0 813 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 BIN1O00499 593 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 RRP9O43818 475 aaKnown RBP12.12□□□□□ -0.47
PDGFD-202ENST00000393158 CCND2P30279 289 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
PDGFD-202ENST00000393158 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 TSPY26PQ9H489 355 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
PDGFD-202ENST00000393158 SLC26A4O43511 780 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 EIF3JO75822 258 aaKnown RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 RHOBTB3O94955 611 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 C1orf186Q6ZWK4 172 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 ANKRD35Q8N283 1001 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 MAML3Q96JK9 1138 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 PDLIM2Q96JY6 352 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 PARK7Q99497 189 aaKnown RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 MMP19Q99542 508 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 RUSC1Q9BVN2 902 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 STRA6Q9BX79 667 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 KIAA1024Q9UPX6 916 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 GSTTP1A0A1W2PQM5 241 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 STAM2O75886 525 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 LYPLA2O95372 231 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 CTTNQ14247 550 aaKnown RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 ANO5Q75V66 913 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 CCDC60Q8IWA6 550 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 HOXC6P09630 235 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 FCER1AP12319 257 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 COBLL1Q53SF7 1204 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 SYT2Q8N9I0 419 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 SYAP1Q96A49 352 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-202ENST00000393158 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
PDGFD-202ENST00000393158 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-202ENST00000393158 ZNF18P17022 549 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 CYP4A11Q02928 519 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 STK4Q13043 487 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 LY6KQ17RY6 165 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 NCAPH2Q6IBW4 605 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-202ENST00000393158 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 CUEDC2Q9H467 287 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 STAT6P42226 847 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 CASP5P51878 434 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 GIT2Q14161 759 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 KCNB1Q14721 858 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 RRAGBQ5VZM2 374 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 IRF2BP1Q8IU81 584 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 FBXO16Q8IX29 292 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-202ENST00000393158 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 ZMYM2Q9UBW7 1377 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 UBA7P41226 1012 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 EPM2AIP1Q7L775 607 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-202ENST00000393158 RRAGDQ9NQL2 400 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-202ENST00000393158 INTS13Q9NVM9 706 aa12.1□□□□□ -0.47
PDGFD-202ENST00000393158 MAFBQ9Y5Q3 323 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-202ENST00000393158 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms